User: sapuizait

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sapuizait0
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Posts by sapuizait

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Comment: A: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
... Thanks for this post robert.kwapich, this is a critical step if u wanna compare groups of samples that have been shotgun-metagenome sequenced! My intitial instinct was to rarefy based on single copy housekeeping bacterial genes or the ykaryotic contamination but i dont wanna reinvent the wheel if th ...
written 11 days ago by sapuizait0
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Answer: A: How/Where do I find mapped GO terms in EggNOG (preferably via FTP download)?
... Hallelujah brother! Thank you, I ve been looking for that for some time now and it was driving me crazy! still cannot find the KEGG identifiers, they mention that it should be there but I cant see it - it could be that its right in front of me and I dont see :) thanks again ...
written 5 weeks ago by sapuizait0
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Answer: A: Has anyone heard the term data warehousing in genomics before?
... Thank you both, you guys have been extremely helpful! ...
written 15 months ago by sapuizait0
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Comment: C: Has anyone heard the term data warehousing in genomics before?
... ok I see, I also saw some videos on youtube about biomart. It is thus not so different from other sites that they are "normal" databases. Is the only difference the bigger amount of data and the multiple databases? ...
written 15 months ago by sapuizait0
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Has anyone heard the term data warehousing in genomics before?
... There is a job opening that I want to apply for and they mention among other skills "data warehousing knowledge". The job description says that the job has to do with gathering and managing genomics data from hospitals related to cancer but I am not sure what do they mean with the "data warehouse" t ...
warehouse data written 15 months ago by sapuizait0

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