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3
votes
4
replies
1.5k
views
genome assembly records not present in assembly_summary.txt
ncbi bacteria assembly
written 17 months ago by ▴ 10
0
votes
0
replies
1.3k
views
Comment: Comment: assemble extracted kmers into longer contigs/sequences
16 months ago by sapuizait ▴ 10
0
votes
1
reply
1.3k
views
Comment: Comment: assemble extracted kmers into longer contigs/sequences
16 months ago by sapuizait ▴ 10
0
votes
1
reply
1.3k
views
Comment: Comment: assemble extracted kmers into longer contigs/sequences
16 months ago by sapuizait ▴ 10
3
votes
5
replies
1.3k
views
assemble extracted kmers into longer contigs/sequences
assembly unique kmers
16 months ago by sapuizait ▴ 10
0
votes
0
replies
1.5k
views
Comment: Comment: genome assembly records not present in assembly_summary.txt
17 months ago by sapuizait ▴ 10
0
votes
0
replies
3.6k
views
Comment: Comment: calculate nucleotide diversity from whole-genome-sequence data for individual ge
20 months ago by sapuizait ▴ 10
0
votes
0
replies
881
views
Comment: Comment: many taxa and many seqs phylogeny
21 months ago by sapuizait ▴ 10
2
votes
2
replies
881
views
many taxa and many seqs phylogeny
raxML fasttree phylogeny
21 months ago by sapuizait ▴ 10
5
votes
1
reply
1.0k
views
samtools extract the non-specified region
samtools
updated 21 months ago by 45k • written 21 months ago by ▴ 10
0
votes
0
replies
2.2k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
2.1 years ago by sapuizait ▴ 10
0
votes
0
replies
2.2k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
2.1 years ago by sapuizait ▴ 10
0
votes
1
reply
2.2k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
2.1 years ago by sapuizait ▴ 10
0
votes
1
reply
2.2k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
updated 2.1 years ago by 45k • written 2.1 years ago by ▴ 10
0
votes
0
replies
2.2k
views
Comment: Comment: more reads in metagenomic samples after 'removing host reads'
2.1 years ago by sapuizait ▴ 10
1
vote
9
replies
2.2k
views
more reads in metagenomic samples after 'removing host reads'
bowtie2 samtools
updated 2.1 years ago by 154k • written 2.1 years ago by ▴ 10
0
votes
1
reply
1.3k
views
Comment: Comment: database for better classification of illumina contigs
2.7 years ago by sapuizait ▴ 10
1
vote
3
replies
1.3k
views
database for better classification of illumina contigs
classification illumina contigs NR
updated 2.7 years ago by ★ 1.8k • written 2.7 years ago by ▴ 10
0
votes
0
replies
1.4k
views
Comment: Comment: why merge assemblies?
3.9 years ago by sapuizait ▴ 10
2
votes
3
replies
1.4k
views
why merge assemblies?
assembly merge illumuna data
3.9 years ago by sapuizait ▴ 10
0
votes
0
replies
4.1k
views
Comment: Comment: kegg IDs to pathways in R
4.0 years ago by sapuizait ▴ 10
0
votes
0
replies
4.1k
views
Comment: Comment: kegg IDs to pathways in R
4.0 years ago by sapuizait ▴ 10
2
votes
4
replies
4.1k
views
kegg IDs to pathways in R
R KEGG list pathways
4.0 years ago by sapuizait ▴ 10
0
votes
0
replies
1.7k
views
Comment: Comment: convert detailed alignment format to fasta
4.2 years ago by sapuizait ▴ 10
0
votes
1
reply
1.7k
views
Comment: Comment: convert detailed alignment format to fasta
updated 4.2 years ago by 166k • written 4.2 years ago by ▴ 10
1
vote
4
replies
1.7k
views
convert detailed alignment format to fasta
alignment
updated 2.2 years ago by 45k • written 4.2 years ago by ▴ 10
0
votes
1
reply
769
views
inexpensive method to detect SNPs in entire bacterial genomes
bacteria SNPs RFLP genome
updated 4.2 years ago by ★ 30k • written 4.2 years ago by ▴ 10
0
votes
0
replies
630
views
need advice for comparing fragment counts of genes across multiple WGS metagenomes
WGS normalization KMA
4.6 years ago by sapuizait ▴ 10
0
votes
0
replies
3.5k
views
Comment: C: cannot download refseq genomes
4.6 years ago by sapuizait ▴ 10
0
votes
0
replies
3.5k
views
Comment: C: cannot download refseq genomes
4.6 years ago by sapuizait ▴ 10
4
votes
6
replies
3.5k
views
cannot download refseq genomes
refseq
updated 2.6 years ago by 45k • written 4.6 years ago by ▴ 10
0
votes
1
reply
3.5k
views
Comment: C: cannot download refseq genomes
4.6 years ago by sapuizait ▴ 10
3
votes
7
replies
1.9k
views
Has anyone heard the term data warehousing in genomics before?
data warehouse
updated 4.6 years ago by • 0 • written 6.9 years ago by ▴ 10
0
votes
0
replies
893
views
recover IMG ids from JGI site
JGI IMG ids
updated 4.7 years ago by 16k • written 4.7 years ago by ▴ 10
0
votes
0
replies
4.7k
views
Comment: A: How/Where do I find mapped GO terms in EggNOG (preferably via FTP download)?
updated 5.2 years ago by 12k • written 5.7 years ago by ▴ 10
0
votes
0
replies
15k
views
Answer: Answer: RNASeq user experience with Novogene?
updated 2.9 years ago by 45k • written 5.3 years ago by ▴ 10
0
votes
0
replies
15k
views
Comment: C: RNASeq user experience with Novogene?
5.3 years ago by sapuizait ▴ 10
0
votes
0
replies
865
views
diamond (blast) exit codes
diamond exit codes
5.6 years ago by sapuizait ▴ 10
0
votes
0
replies
7.3k
views
Comment: A: Shotgun rarefactions - metagenomics (microbiome), MetaPhlAn2
5.7 years ago by sapuizait ▴ 10
0
votes
0
replies
1.9k
views
Answer: A: Has anyone heard the term data warehousing in genomics before?
6.9 years ago by sapuizait ▴ 10
0
votes
1
reply
1.9k
views
Comment: C: Has anyone heard the term data warehousing in genomics before?
6.9 years ago by sapuizait ▴ 10
41 results • Page 1 of 1
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