Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
2
votes
1
reply
653
views
Answer: Answer: Transcriptome assembly -mixing stranded and non-stranded data
2.1 years ago by lieven.sterck 15k
0
votes
0
replies
919
views
Answer: Answer: Is There any command for retrieval (extraction) of covered sequence using Linux
2.2 years ago by lieven.sterck 15k
0
votes
0
replies
602
views
Answer: Answer: generating draft genome
2.2 years ago by lieven.sterck 15k
1
vote
1
reply
1.8k
views
Answer: Answer: Technical and Biological reads difference
2.3 years ago by lieven.sterck 15k
1
vote
0
replies
1.1k
views
Answer: Answer: Downloading a subset of sequences from the NCBI nucleotide database
2.3 years ago by lieven.sterck 15k
3
votes
1
reply
608
views
Answer: Answer: Create GFF3 file based on genomic fasta and cds fasta
2.3 years ago by lieven.sterck 15k
2
votes
1
reply
785
views
Answer: Answer: What are accession numbers starting with PIR e.g. PIR60289?
2.3 years ago by lieven.sterck 15k
2
votes
1
reply
1.9k
views
Answer: Answer: delete a file
2.3 years ago by lieven.sterck 15k
0
votes
1
reply
895
views
Answer: Answer: What should be the best parameter to perform blastp
2.3 years ago by lieven.sterck 15k
4
votes
0
replies
1.2k
views
Answer: Answer: Can an enzyme have multiple EC numbers?
2.4 years ago by lieven.sterck 15k
4
votes
0
replies
925
views
Answer: Answer: Basename the contents of a file
2.4 years ago by lieven.sterck 15k
2
votes
1
reply
1.1k
views
Answer: Answer: How to find a list homologous genes from different species?
2.4 years ago by lieven.sterck 15k
2
votes
0
replies
1.6k
views
Answer: Answer: Difference in Contig Lengths from Transcriptome and Whole Genome Assembly
2.4 years ago by lieven.sterck 15k
0
votes
2
replies
1.4k
views
Answer: Answer: blast returns staxid N/A and staxids 0
2.4 years ago by lieven.sterck 15k
3
votes
0
replies
1.3k
views
Answer: Answer: Is there a database of bioinformatics tools & databases?
2.4 years ago by lieven.sterck 15k
1
vote
1
reply
1.4k
views
Answer: Answer: Representable, non-homologous, non-redundant protein database
2.4 years ago by lieven.sterck 15k
0
votes
0
replies
884
views
Answer: Answer: Conserved regions in multiple fasta files (multiple species)?
2.4 years ago by lieven.sterck 15k
2
votes
1
reply
1.5k
views
Answer: Answer: Run multiple times samtools and sed for a big number of bam files in folder
2.4 years ago by lieven.sterck 15k
1
vote
2
replies
1.5k
views
Answer: Answer: Trimmomatic Error
2.5 years ago by lieven.sterck 15k
1
vote
1
reply
1.1k
views
Answer: Answer: Having a deletion coordinates how to know in which gene this is?
2.5 years ago by lieven.sterck 15k
0
votes
0
replies
2.3k
views
Answer: Answer: Remove Gaps from Multiple sequence alignment
2.5 years ago by lieven.sterck 15k
0
votes
1
reply
710
views
Answer: Answer: Extracting proteome and transcriptome from genome and its corresponding GFF
2.5 years ago by lieven.sterck 15k
3
votes
0
replies
1.2k
views
Answer: Answer: I'm not sure my Bulk RNAseq read counts extracted from fastq file are correct
2.5 years ago by lieven.sterck 15k
0
votes
0
replies
584
views
Answer: Answer: Change names of all sequences in a MSA
2.5 years ago by lieven.sterck 15k
1
vote
1
reply
1.8k
views
Answer: Answer: What is eggnog better than previous annotation in terms of?
2.5 years ago by lieven.sterck 15k
1
vote
1
reply
3.9k
views
Answer: Answer: What files (fasta, GTF) do I need for RNA seq analysis
2.5 years ago by lieven.sterck 15k
1
vote
0
replies
1.9k
views
Answer: Answer: Non biology & computer professional interested in bioinformatics
2.6 years ago by lieven.sterck 15k
1
vote
0
replies
1.4k
views
Answer: Answer: Courses in RNAseq data
2.6 years ago by lieven.sterck 15k
0
votes
0
replies
1.0k
views
Answer: Answer: Protein filtering for annotation
2.6 years ago by lieven.sterck 15k
2
votes
0
replies
2.0k
views
Answer: Answer: RNAseq count which strand to use
2.6 years ago by lieven.sterck 15k
1
vote
1
reply
2.5k
views
Answer: Answer: Splice aware vs splice unaware aligners?
2.6 years ago by lieven.sterck 15k
0
votes
1
reply
1.1k
views
Answer: Answer: Downloading PE reads from SRA but reads are not split
2.6 years ago by lieven.sterck 15k
1
vote
1
reply
1.1k
views
Answer: Answer: What does it mean BLASTx in de novo RNAseq analysis?
2.6 years ago by lieven.sterck 15k
1
vote
1
reply
1.6k
views
Answer: Answer: bbduk can't read file
2.6 years ago by lieven.sterck 15k
1
vote
1
reply
1.8k
views
Answer: Answer: How can I extract upstream regions in fasta for all blastx hits locally performe
2.6 years ago by lieven.sterck 15k
3
votes
1
reply
1.4k
views
Answer: Answer: Genome assembly, removal of conting below 300 bp?
2.6 years ago by lieven.sterck 15k
1
vote
1
reply
1.0k
views
Answer: Answer: Use one few genes instead of reference genome in mapping
2.6 years ago by lieven.sterck 15k
2
votes
1
reply
1.4k
views
Answer: Answer: How does PacBio Iso -Seq Annotation compare to other pipelines?
2.6 years ago by lieven.sterck 15k
2
votes
1
reply
1.7k
views
Answer: Answer: "Simplifing" a very fragmented genome for visualisation?
2.7 years ago by lieven.sterck 15k
0
votes
1
reply
855
views
Answer: Answer: how to get the name of a protein from a sequence?
2.7 years ago by lieven.sterck 15k
1
vote
0
replies
1.3k
views
Answer: Answer: How to adjust sequence line to 60bp?
2.7 years ago by lieven.sterck 15k
1
vote
1
reply
2.1k
views
Answer: Answer: Identification of transcription factors from a list of DEGs
2.7 years ago by lieven.sterck 15k
0
votes
1
reply
1.2k
views
Answer: Answer: How to convert gene names to EC numbers?
2.8 years ago by lieven.sterck 15k
2
votes
0
replies
928
views
Answer: Answer: Gene prediction methods
2.8 years ago by lieven.sterck 15k
0
votes
1
reply
2.2k
views
Answer: Answer: When to merge sequencing data from multiple lanes (FastQToSam, SamToFastq, BWA,
2.8 years ago by lieven.sterck 15k
2
votes
0
replies
596
views
Answer: Answer: Is strand specific library always better for RNA-seq?
2.8 years ago by lieven.sterck 15k
1
vote
1
reply
637
views
Answer: Answer: RNA-seq analysis
2.8 years ago by lieven.sterck 15k
0
votes
1
reply
2.1k
views
Answer: Answer: Getting blastn results for the complementary strand
2.8 years ago by lieven.sterck 15k
2
votes
1
reply
938
views
Answer: Answer: How to perform alternative splicing from RNA Seq data?
2.8 years ago by lieven.sterck 15k
3
votes
1
reply
2.1k
views
Answer: Answer: Extract CDS from maker gff
2.8 years ago by lieven.sterck 15k
470 results • Page 2 of 10
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6