Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In

User: Farbod

gravatar for Farbod
Farbod • 2.9k
Reputation:
2,940
Status:
Trusted
Location:
Montreal
Last seen:
2 months ago
Joined:
1 year, 2 months ago
Email:
s**********@yahoo.com

Hi, I love Biology and Genetics and I have done my PhD thesis on "sturgeon fish RNA-seq" as my MSc was in aquaculture. I am interested in miRNA and epigenetics, too. And having about 4 years of experience in the field of bioinformatics. 

Posts by Farbod

<prev • 493 results • page 1 of 50 • next >
0
votes
0
answers
87
views
0
answers
News: Free Nature-Webcast: Circulating Tumour Cells
... **Circulating Tumour Cells: Liquid biopsy by high-throughput, high-resolution imaging flow cytometry** Date: March 28, 2017 Time: 8am PDT / 11am EDT / 4pm BST / 5pm CEST **Price: FREE** **Speakers** ![enter image description here][1] Dr David Jamieson, Northern Institute for Cancer Research ...
news nature written 10 weeks ago by Farbod • 2.9k
0
votes
0
answers
128
views
0
answers
Comment: C: Ensembl in Google Summer of Code
... Emily_Ensembl, Hi Thanks for sharing this news. ~ Best ...
written 10 weeks ago by Farbod • 2.9k
0
votes
1
answer
199
views
1
answers
Comment: C: BeeDeeM: the bioinformatics databank manager system
... Dear Patrick, Hi Thank you for sharing this tool. ~ Best ...
written 10 weeks ago by Farbod • 2.9k
2
votes
1
answer
186
views
1
answers
Answer: A: RNA seq differential expression clustering tools
... Dear guillaume.rbt, Hi You can use many R packages for expression clustering, please have a look at: [Interactive Heatmap in R][1] or [Trinity Automatically Partitioning Genes into Expression Clusters][2] ~ Bon courage! [1]: http://www.sthda.com/english/wiki/static-and-interactive-heatmap-i ...
written 11 weeks ago by Farbod • 2.9k
1
vote
0
answers
154
views
0
answers
News: edX Bioinformatics: A series of credit-eligible courses recognized by industry
... ![enter image description here][1] [Bioinformatics][2] *Learn how to analyze biological big data to unlock the next big biotech discovery.* **Job Outlook** Bioinformatics Scientist is expected to grow rapidly in the next several years and have roughly 10,000 new job openings from 2014-2024 (O*Ne ...
alignment news online course edx proteins written 11 weeks ago by Farbod • 2.9k
0
votes
0
answers
94
views
0
answers
News: Genomics: Decoding the Universal Language of Life
... Dear Biostars, Hi There is a **new** course in [Coursera][1] about **"Genomics"** by **University of Illinois** at Urbana-Champaign. ![enter image description here][2] ~ Best [1]: https://www.coursera.org/learn/genomics-research/home/welcome [2]: https://d3njjcbhbojbot.cloudfront.net/api/ut ...
news online course coursera written 12 weeks ago by Farbod • 2.9k
0
votes
1
answer
214
views
1
answers
Comment: C: Fold Change accepts, FDR denies; which one to use ?
... Dear Devon Ryan, Hi and thank you. As an expert in this field, could you please mention a reference "paper" about this strategy (ignoring the FDR and using FC threshold) for me? ~ Best ...
written 3 months ago by Farbod • 2.9k
0
votes
1
answer
214
views
1
answers
Comment: C: Fold Change accepts, FDR denies; which one to use ?
... Dear WouterDeCoster, I am using the gonads of each gender. Trinity usually reports several isoforms for each gene. ...
written 3 months ago by Farbod • 2.9k
0
votes
1
answer
214
views
1
answers
Comment: C: Fold Change accept, FDR deny; which one to use ?
... 1- thank you for your complete explanation. I have 3 biological replication for males and 3 for females (So, 6 samples in total and I am comparing DEG between sexes). I have TMM values and Trinity have used it for matrix and heatmap creation. can I use the TMM values for my box-plot drawing ? t ...
written 3 months ago by Farbod • 2.9k
0
votes
1
answer
214
views
1
answers
Comment: C: Fold Change accept, FDR deny; which one to use ?
... Good question. ;-) In the gene level DEG analysis pipeline of Trinity, **FDR** for these 11 isoforms is **0.8** and the **log2FC** is **-0.6** toward the females (which **is not correct** because **(1)** most isoforms are up-regulated in males, **(2)** the other researches showed that this gene is ...
written 3 months ago by Farbod • 2.9k

Latest awards to Farbod

Scholar 11 weeks ago, created an answer that has been accepted. For A: mireap procedure short tutorial
Appreciated 3 months ago, created a post with more than 5 votes. For A: Tools for categorize COG/KOG list
Teacher 5 months ago, created an answer with at least 3 up-votes. For C: Can't open gz file
Scholar 7 months ago, created an answer that has been accepted. For A: mireap procedure short tutorial
Teacher 7 months ago, created an answer with at least 3 up-votes. For C: Can't open gz file
Teacher 7 months ago, created an answer with at least 3 up-votes. For C: Can't open gz file
Commentator 7 months ago, created a comment with at least 3 up-votes. For C: what is the evolutionary importance of existance of cancer gene(s) in other anim
Guru 7 months ago, received more than 100 upvotes.
Scholar 7 months ago, created an answer that has been accepted. For A: mireap procedure short tutorial
Scholar 8 months ago, created an answer that has been accepted. For A: mireap procedure short tutorial
Teacher 8 months ago, created an answer with at least 3 up-votes. For C: Can't open gz file
Centurion 9 months ago, created 100 posts.
Voter 9 months ago, voted more than 100 times.
Supporter 10 months ago, voted at least 25 times.
Autobiographer 10 months ago, has more than 80 characters in the information field of the user's profile.
Commentator 10 months ago, created a comment with at least 3 up-votes. For C: what is the evolutionary importance of existance of cancer gene(s) in other anim
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 573 users visited in the last hour