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5
votes
1
reply
4.2k
views
Answer: A: What is "mappability"?
6.4 years ago by WouterDeCoster 48k
0
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1
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1.1k
views
Comment: C: Comparing 2 MAF files for differences when generated using different genome buil
6.4 years ago by WouterDeCoster 48k
0
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0
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1.3k
views
Comment: C: How to subtract out wildtype variants, and what is it?
6.4 years ago by WouterDeCoster 48k
0
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0
replies
994
views
Comment: C: sorted bam file
6.4 years ago by WouterDeCoster 48k
0
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1
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1.9k
views
Comment: C: new file with line in common
6.4 years ago by WouterDeCoster 48k
0
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1
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13k
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Comment: C: Processing Raw Nanopore Data
6.4 years ago by WouterDeCoster 48k
0
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1
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11k
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Comment: C: samtools sort: failed to create temporary file "/BOredq/NA12878.sorted.bam.tmp.0
6.4 years ago by WouterDeCoster 48k
0
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0
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1.9k
views
Comment: C: new file with line in common
6.4 years ago by WouterDeCoster 48k
0
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1
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2.6k
views
Comment: C: Running Trimmomatic for bulk RNAseq data
6.4 years ago by WouterDeCoster 48k
0
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0
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1.9k
views
Comment: C: extract region from the bam file
6.4 years ago by WouterDeCoster 48k
2
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2
replies
11k
views
Answer: A: samtools sort: failed to create temporary file "/BOredq/NA12878.sorted.bam.tmp.0
6.4 years ago by WouterDeCoster 48k
0
votes
0
replies
1.9k
views
Comment: C: extract region from the bam file
6.4 years ago by WouterDeCoster 48k
5
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2
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13k
views
Answer: A: Proceccing Raw Nanopore Data
6.4 years ago by WouterDeCoster 48k
1
vote
0
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1.4k
views
Comment: C: Finding Significant Amino Acid Changes Between Species
6.4 years ago by WouterDeCoster 48k
0
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1
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1.4k
views
Comment: C: Finding Significant Amino Acid Changes Between Species
6.4 years ago by WouterDeCoster 48k
1
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0
replies
3.1k
views
Answer: A: Confused about TSS coordinates
6.4 years ago by WouterDeCoster 48k
0
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1
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1.3k
views
Comment: C: Is it ok to use genotype replicates for association studies?
6.4 years ago by WouterDeCoster 48k
2
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1
reply
4.2k
views
Answer: A: peaks in IGV
6.4 years ago by WouterDeCoster 48k
0
votes
1
reply
8.8k
views
Comment: C: Why are there many reads with green color in IGV of RNA-seq data?
6.4 years ago by WouterDeCoster 48k
2
votes
2
replies
12k
views
Answer: A: Nanopore data and downstream anlysis
6.4 years ago by WouterDeCoster 48k
0
votes
1
reply
33k
views
Comment: C: How to download the complete database Nucleotide collection (nr/nt)?
6.4 years ago by WouterDeCoster 48k
0
votes
0
replies
506
views
Comment: C: NGS & Microarray Custom Data Analysis Training Program
6.4 years ago by WouterDeCoster 48k
2
votes
1
reply
33k
views
Comment: C: How to download the complete database Nucleotide collection (nr/nt)?
6.4 years ago by WouterDeCoster 48k
1
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0
replies
3.0k
views
Answer: A: Export Coverage on IGV
6.4 years ago by WouterDeCoster 48k
0
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0
replies
1.9k
views
Comment: C: qPCR gene expression confusion
6.4 years ago by WouterDeCoster 48k
0
votes
1
reply
1.3k
views
Comment: C: I've run SCRATCH Suite (SSPro, ACCPro), downloaded from here, but an error messa
6.4 years ago by WouterDeCoster 48k
0
votes
1
reply
1.3k
views
Comment: C: I've run SCRATCH Suite (SSPro, ACCPro), downloaded from here, but an error messa
6.4 years ago by WouterDeCoster 48k
0
votes
0
replies
3.1k
views
Comment: C: Illumina hiseq 2500 strand specificity for paired-end datasets
6.4 years ago by WouterDeCoster 48k
0
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0
replies
6.6k
views
Comment: C: is fortran still used in bioinformatics?
6.4 years ago by WouterDeCoster 48k
1
vote
1
reply
3.1k
views
Answer: A: Illumina hiseq 2500 strand specificity for paired-end datasets
6.4 years ago by WouterDeCoster 48k
0
votes
0
replies
1.1k
views
Comment: C: How to create a mutation landscape from a VCF file?
6.4 years ago by WouterDeCoster 48k
3
votes
1
reply
4.8k
views
Answer: A: Can you detect novel (non-coding) transcripts using Salmon and the hg38 transcri
6.4 years ago by WouterDeCoster 48k
2
votes
0
replies
1.8k
views
Comment: C: Are small insertions always single-stranded?
6.4 years ago by WouterDeCoster 48k
0
votes
1
reply
3.7k
views
Comment: C: Multiple reference alleles in vcf file
6.4 years ago by WouterDeCoster 48k
3
votes
1
reply
1.8k
views
Answer: C: Are small insertions always single-stranded?
6.4 years ago by WouterDeCoster 48k
4
votes
1
reply
6.6k
views
Comment: C: is fortran still used in bioinformatics?
6.4 years ago by WouterDeCoster 48k
0
votes
0
replies
6.0k
views
Comment: C: Struggling to use the GATK HaplotypeCaller on my bam files.
6.4 years ago by WouterDeCoster 48k
3
votes
1
reply
2.4k
views
Answer: A: How to predict sample ethnicty from a VCF using 1000G or gnomAD ?
6.4 years ago by WouterDeCoster 48k
1
vote
0
replies
1.5k
views
Comment: C: bcftools view: index -R not better than -T
6.4 years ago by WouterDeCoster 48k
2
votes
0
replies
8.6k
views
Comment: C: convert genome file to transcriptome file
6.4 years ago by WouterDeCoster 48k
0
votes
1
reply
1.7k
views
Comment: C: How to find out human mtDNA genes in d-loop control region for Indian origin onl
6.4 years ago by WouterDeCoster 48k
1
vote
1
reply
1.6k
views
Comment: C: Why do I have more than 5000 variants when I used a 5K snp array?
6.4 years ago by WouterDeCoster 48k
1
vote
1
reply
3.4k
views
Comment: C: What are valid VCF symbolic alternate alleles for structural variants?
6.4 years ago by WouterDeCoster 48k
2
votes
1
reply
1.8k
views
Comment: C: vcftools merge: Incorrect number of F1R2 fields (2) at chr12:29486505, cannot me
6.4 years ago by WouterDeCoster 48k
2
votes
1
reply
1.8k
views
Comment: C: vcftools merge: Incorrect number of F1R2 fields (2) at chr12:29486505, cannot me
6.4 years ago by WouterDeCoster 48k
2
votes
0
replies
3.6k
views
Comment: C: bed graph and IGV
6.4 years ago by WouterDeCoster 48k
0
votes
1
reply
3.6k
views
Comment: C: bed graph and IGV
6.4 years ago by WouterDeCoster 48k
0
votes
0
replies
7.4k
views
Comment: C: Tool to fix reference allele nucleotide in vcf
6.4 years ago by WouterDeCoster 48k
1
vote
1
reply
7.4k
views
Comment: C: Tool to fix reference allele nucleotide in vcf
6.4 years ago by WouterDeCoster 48k
1
vote
1
reply
7.4k
views
Comment: C: Tool to fix reference allele nucleotide in vcf
6.4 years ago by WouterDeCoster 48k
7,263 results • Page 14 of 146
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