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Comment: Comment: Plink 2 user error converting .bgen to bcf
3.8 years ago by Sam ★ 4.8k
2
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2.6k
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Answer: Answer: How to open the genotype information in a bed file in R or Ubuntu
3.8 years ago by Sam ★ 4.8k
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8.0k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
3.8 years ago by Sam ★ 4.8k
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8.0k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
3.8 years ago by Sam ★ 4.8k
0
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2
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8.0k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
3.8 years ago by Sam ★ 4.8k
1
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1.5k
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Comment: Comment: Why the polygenic risk scores calculated by Plink and PRSice-2 are different
3.8 years ago by Sam ★ 4.8k
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3.7k
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Comment: Comment: Clumping error Plink
3.8 years ago by Sam ★ 4.8k
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3.7k
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Answer: Answer: Clumping error Plink
3.8 years ago by Sam ★ 4.8k
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1
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1.5k
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Comment: Comment: UK Biobank difference in number of patients diagnosed in field 41270 vs extracte
3.8 years ago by Sam ★ 4.8k
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2.1k
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Comment: Comment: GWAS with SAIGE - how to proceed
3.8 years ago by Sam ★ 4.8k
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852
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Comment: Comment: Insertion/Deletion in R
3.8 years ago by Sam ★ 4.8k
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1.0k
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Answer: Answer: Difference between LDpred1,PT+Clump,Lassosum methods
3.8 years ago by Sam ★ 4.8k
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975
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Comment: Comment: Change SNP ID strings in PLINK files
3.8 years ago by Sam ★ 4.8k
1
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1
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2.1k
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Comment: Comment: GWAS with SAIGE - how to proceed
3.8 years ago by Sam ★ 4.8k
2
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2.8k
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Comment: Comment: Polygenic Risk Score Calculation: Do we need to apply the same p-value threshold
3.8 years ago by Sam ★ 4.8k
3
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2.8k
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Answer: Answer: Polygenic Risk Score Calculation: Do we need to apply the same p-value threshold
3.8 years ago by Sam ★ 4.8k
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4.6k
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Comment: Comment: Could NOT find ZLIB while running cmake
3.8 years ago by Sam ★ 4.8k
0
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0
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5.5k
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Comment: Comment: How to add phenotypic data to .fam in plink (specifically, assign 1 and 2 to cas
3.9 years ago by Sam ★ 4.8k
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1
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5.5k
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Comment: Comment: How to add phenotypic data to .fam in plink (specifically, assign 1 and 2 to cas
3.9 years ago by Sam ★ 4.8k
1
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3
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5.5k
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Answer: Answer: How to add phenotypic data to .fam in plink (specifically, assign 1 and 2 to cas
3.9 years ago by Sam ★ 4.8k
2
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0
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1.3k
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Answer: Answer: Liftover using gVCF
3.9 years ago by Sam ★ 4.8k
0
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1
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2.4k
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Comment: Comment: Polygenetic risk score construction in UKBB
3.9 years ago by Sam ★ 4.8k
1
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0
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1.2k
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Answer: Answer: How can I make sure certain SNPs are not removed during the clumping stage of PR
3.9 years ago by Sam ★ 4.8k
0
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0
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2.9k
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Comment: Comment: Polygenetic Risk Score Calculation
3.9 years ago by Sam ★ 4.8k
0
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1
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2.9k
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Answer: Answer: Polygenetic Risk Score Calculation
3.9 years ago by Sam ★ 4.8k
0
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0
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2.3k
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Comment: Comment: One-hot encoding for PLINK or VCF
3.9 years ago by Sam ★ 4.8k
0
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1
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2.3k
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Comment: Comment: One-hot encoding for PLINK or VCF
3.9 years ago by Sam ★ 4.8k
1
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0
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4.8k
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Answer: Answer: nextflow DSL2: best practice to design and reuse a process/worfklow
3.9 years ago by Sam ★ 4.8k
0
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1
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2.4k
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Comment: Comment: Polygenetic risk score construction in UKBB
3.9 years ago by Sam ★ 4.8k
0
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1
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2.4k
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Comment: Comment: Polygenetic risk score construction in UKBB
3.9 years ago by Sam ★ 4.8k
0
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1
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3.7k
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Comment: Comment: Calculating polygenic score using plink
3.9 years ago by Sam ★ 4.8k
0
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0
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1.7k
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Comment: Comment: Gwas Help.
3.9 years ago by Sam ★ 4.8k
2
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1
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3.7k
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Answer: Answer: Calculating polygenic score using plink
3.9 years ago by Sam ★ 4.8k
0
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0
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2.6k
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Comment: Comment: Many SNPs getting excluded during PRSice 2 analysis
3.9 years ago by Sam ★ 4.8k
2
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1
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2.6k
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Answer: Answer: Many SNPs getting excluded during PRSice 2 analysis
3.9 years ago by Sam ★ 4.8k
2
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0
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1.5k
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Answer: Answer: PRSice 2 results
3.9 years ago by Sam ★ 4.8k
0
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0
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2.9k
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Answer: Answer: How to analyze genotype data and imputed data in GWAS study
3.9 years ago by Sam ★ 4.8k
0
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1
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3.6k
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Comment: Comment: Plink2 --keep Removing All Samples
4.0 years ago by Sam ★ 4.8k
1
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0
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1.7k
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Comment: Comment: Getting error at the clumping stage of PRSice 2
4.0 years ago by Sam ★ 4.8k
2
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1
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1.7k
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Answer: Answer: Getting error at the clumping stage of PRSice 2
4.0 years ago by Sam ★ 4.8k
0
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0
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1.4k
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Comment: Comment: Polygenic scores in diabetic individuals across UKBB
4.0 years ago by Sam ★ 4.8k
2
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1
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1.4k
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Answer: Answer: Polygenic scores in diabetic individuals across UKBB
4.0 years ago by Sam ★ 4.8k
0
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0
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4.2k
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Comment: Comment: GWAS - Relationship between Standard Error and P-value
4.0 years ago by Sam ★ 4.8k
0
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1
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3.5k
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Comment: Comment: how to improve PCA visualization using ggplot?
4.0 years ago by Sam ★ 4.8k
5
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1
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3.5k
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Answer: Answer: how to improve PCA visualization using ggplot?
4.0 years ago by Sam ★ 4.8k
0
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1
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4.4k
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Comment: Comment: PRSice 2
4.0 years ago by Sam ★ 4.8k
1
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1
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4.4k
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Comment: Comment: PRSice 2
4.0 years ago by Sam ★ 4.8k
1
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1
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4.4k
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Comment: Comment: PRSice 2
4.0 years ago by Sam ★ 4.8k
2
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1
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2.8k
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Answer: Answer: (LDSC) - Munge Error - ValueError: could not convert string to float: OR
4.0 years ago by Sam ★ 4.8k
2
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1
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4.4k
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Answer: Answer: PRSice 2
4.0 years ago by Sam ★ 4.8k
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