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Answer: Answer: Genetic risk score calculated using SNPs with mixed effect directions
12 weeks ago by Sam ★ 4.6k
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389
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Comment: Comment: Free access European cohort study
3 months ago by Sam ★ 4.6k
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368
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Answer: Answer: Manual Polygenic Risk Score calculation
3 months ago by Sam ★ 4.6k
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2.2k
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Comment: Comment: PRSice: how to obtain exact list of SNPs used for PRSice.best
4 months ago by Sam ★ 4.6k
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418
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Answer: Answer: PLINK - tutorial - PRS calculation
5 months ago by Sam ★ 4.6k
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378
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Answer: Answer: instead of linear regression, do logistic regression plink prs tutorial.
5 months ago by Sam ★ 4.6k
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499
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Comment: Comment: Error: No valid entries in --score file. [PLINK]
6 months ago by Sam ★ 4.6k
2
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303
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Answer: Answer: Get variant type from genotype data
6 months ago by Sam ★ 4.6k
3
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1
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495
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Answer: Answer: PRSice-2 Documentation
7 months ago by Sam ★ 4.6k
4
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1
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644
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Answer: Answer: What is the best way to read PLINK .raw format files into R?
7 months ago by Sam ★ 4.6k
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475
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Answer: Answer: PRSice: Error in getopt(spec = spec, opt = args) : long flag "cov" is ambiguous
8 months ago by Sam ★ 4.6k
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1.2k
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Comment: Comment: Problem with including covariates in PRS analysis using PRSice
8 months ago by Sam ★ 4.6k
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2.8k
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Comment: Comment: PRS regression and covariates
9 months ago by Sam ★ 4.6k
2
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1
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326
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Answer: Answer: Number of SNPs included in the PRS calculation (PRSice)
13 months ago by Sam ★ 4.6k
1
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1
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467
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Answer: Answer: PRSice clumping was not processed for almost 9 hours with a stopped progress rat
13 months ago by Sam ★ 4.6k
0
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1
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628
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Comment: Comment: How to dupicate a sample entry in VCF files or PLINK
14 months ago by Sam ★ 4.6k
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1
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628
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Comment: Comment: How to dupicate a sample entry in VCF files or PLINK
14 months ago by Sam ★ 4.6k
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425
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Comment: Comment: Polygenic risk scores from different GWAS studies
14 months ago by Sam ★ 4.6k
1
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1
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425
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Answer: Answer: Polygenic risk scores from different GWAS studies
14 months ago by Sam ★ 4.6k
2
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1
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665
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Answer: Answer: Help a beginner, results from plink logistic regression don't seem to make sense
updated 10 weeks ago by 39k • written 15 months ago by ★ 4.6k
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324
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Comment: Comment: KING relatedness inference hanging
15 months ago by Sam ★ 4.6k
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2
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2.9k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
15 months ago by Sam ★ 4.6k
0
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1
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2.9k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
15 months ago by Sam ★ 4.6k
3
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0
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491
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Answer: Answer: PLINK dosage gives some "NA"s for dichotomic and continuous outcome after analys
15 months ago by Sam ★ 4.6k
1
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1
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491
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Comment: Comment: PLINK dosage gives some "NA"s for dichotomic and continuous outcome after analys
15 months ago by Sam ★ 4.6k
0
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1
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2.9k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
15 months ago by Sam ★ 4.6k
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0
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1.2k
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Comment: Comment: How to Install PRISice
15 months ago by Sam ★ 4.6k
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1
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1.2k
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Comment: Comment: How to Install PRISice
15 months ago by Sam ★ 4.6k
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0
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1.2k
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Comment: Comment: --chr-set PLINK
15 months ago by Sam ★ 4.6k
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1
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2.9k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
15 months ago by Sam ★ 4.6k
0
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0
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490
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Answer: Answer: How do I use PLINK to filter out SNPs?
15 months ago by Sam ★ 4.6k
0
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1
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757
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Comment: Comment: GWAS and Hetrozigosity
16 months ago by Sam ★ 4.6k
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1
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757
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Comment: Comment: GWAS and Hetrozigosity
16 months ago by Sam ★ 4.6k
2
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1
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674
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Answer: Answer: Merge Score in plink
16 months ago by Sam ★ 4.6k
0
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1
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2.9k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
16 months ago by Sam ★ 4.6k
2
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1
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784
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Answer: Answer: How to open the genotype information in a bed file in R or Ubuntu
16 months ago by Sam ★ 4.6k
0
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1
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2.9k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
16 months ago by Sam ★ 4.6k
0
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1
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2.9k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
16 months ago by Sam ★ 4.6k
0
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2
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2.9k
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Comment: Comment: Plink 2 user error converting .bgen to bcf
16 months ago by Sam ★ 4.6k
1
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0
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689
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Comment: Comment: Why the polygenic risk scores calculated by Plink and PRSice-2 are different
16 months ago by Sam ★ 4.6k
0
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0
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1.4k
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Comment: Comment: Clumping error Plink
16 months ago by Sam ★ 4.6k
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1
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1.4k
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Answer: Answer: Clumping error Plink
16 months ago by Sam ★ 4.6k
0
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1
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664
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Comment: Comment: UK Biobank difference in number of patients diagnosed in field 41270 vs extracte
16 months ago by Sam ★ 4.6k
1
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0
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860
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Comment: Comment: GWAS with SAIGE - how to proceed
16 months ago by Sam ★ 4.6k
0
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0
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378
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Comment: Comment: Insertion/Deletion in R
16 months ago by Sam ★ 4.6k
2
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0
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430
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Answer: Answer: Difference between LDpred1,PT+Clump,Lassosum methods
16 months ago by Sam ★ 4.6k
0
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0
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431
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Comment: Comment: Change SNP ID strings in PLINK files
16 months ago by Sam ★ 4.6k
1
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1
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860
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Comment: Comment: GWAS with SAIGE - how to proceed
16 months ago by Sam ★ 4.6k
2
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0
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1.2k
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Comment: Comment: Polygenic Risk Score Calculation: Do we need to apply the same p-value threshold
17 months ago by Sam ★ 4.6k
3
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1
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1.2k
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Answer: Answer: Polygenic Risk Score Calculation: Do we need to apply the same p-value threshold
17 months ago by Sam ★ 4.6k
635 results • Page 1 of 13
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