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Answer: Answer: Which GWGAS Tool is 'better', MAGMA or LDSC?
2.8 years ago by Sam ★ 4.7k
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Answer: Answer: How to view if a gene is protein-coding?
2.8 years ago by Sam ★ 4.7k
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829
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Answer: Answer: plink2 cannot identify options when looping the chromosomes
2.8 years ago by Sam ★ 4.7k
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772
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Answer: Answer: Obtaining all independent SNPs
2.9 years ago by Sam ★ 4.7k
2
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1
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1.4k
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Answer: Answer: How to change my SNP Id format from chr1_847228_C_T to chr1_847228 in my .bim
2.9 years ago by Sam ★ 4.7k
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1.2k
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Answer: Answer: PGS Catalog file does not have rsID
2.9 years ago by Sam ★ 4.7k
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2.2k
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Answer: Answer: Preparing Target Data
2.9 years ago by Sam ★ 4.7k
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1.1k
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Answer: Answer: I'm having some problems when I calculated PRS by PRsice
2.9 years ago by Sam ★ 4.7k
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2.2k
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Answer: Answer: LDSC -Genetic correlation, some results all have NA valuies
3.0 years ago by Sam ★ 4.7k
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1.5k
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Answer: Answer: Can Meta-GWAS summary statistic results be used for Meta-GWAS (For example, META
3.0 years ago by Sam ★ 4.7k
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1.9k
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Answer: Answer: Genotype Data in PLINK
3.1 years ago by Sam ★ 4.7k
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1.2k
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Answer: Answer: Create a phenotype file in PLINK format
3.1 years ago by Sam ★ 4.7k
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911
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Answer: Answer: SNP's datasets and pedigreees
3.1 years ago by Sam ★ 4.7k
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2
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3.1k
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Answer: Answer: PRS using PGS Catalog
3.1 years ago by Sam ★ 4.7k
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1.3k
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Answer: A: Why PLINK is producing different LD result with the same dataset?
3.1 years ago by Sam ★ 4.7k
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1.1k
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Answer: C: plink --indep LD calculation and filtering to VCF file in one command
3.1 years ago by Sam ★ 4.7k
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2
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855
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Answer: C: How do I perform MAF analysis for each family separately in PLINK?
3.1 years ago by Sam ★ 4.7k
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1.7k
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Answer: A: Remove Chr:position format to just Chr
3.1 years ago by Sam ★ 4.7k
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1.6k
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Answer: A: PRSice on Imputation vcf.gz data; conversion of files
3.1 years ago by Sam ★ 4.7k
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3.2k
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Answer: A: Error in y - mu : non-numeric argument to binary operator - linear regression lo
3.1 years ago by Sam ★ 4.7k
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2
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2.3k
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Answer: A: ERROR::: vcf to PLINK
3.2 years ago by Sam ★ 4.7k
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3
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1.4k
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Answer: A: Reading multiple csv files and perform Two Sample Mendelian Randomization in R
3.2 years ago by Sam ★ 4.7k
2
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1
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1.3k
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Answer: A: possible to convert hg19 coordinated position to hg38 coordinated position??
3.2 years ago by Sam ★ 4.7k
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3.1k
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Answer: A: For loop with 2 variables
3.2 years ago by Sam ★ 4.7k
3
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799
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Answer: A: Error: object not found - Second loop
3.4 years ago by Sam ★ 4.7k
2
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1
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1.2k
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Answer: A: filtering column based on column header from a file
3.5 years ago by Sam ★ 4.7k
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0
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4.8k
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Answer: A: Replacing NA values of a column using values from another column
3.5 years ago by Sam ★ 4.7k
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1.1k
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Answer: A: Re-joining sample ID's and snp information from bgen files for analysis in R
3.6 years ago by Sam ★ 4.7k
2
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2
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3.0k
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Answer: A: PRSice: how to obtain exact list of SNPs used for PRSice.best
3.6 years ago by Sam ★ 4.7k
2
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1
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1.7k
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Answer: A: is it possible to know individual genotype(alleles) by SNP in plink?
3.6 years ago by Sam ★ 4.7k
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0
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873
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Answer: A: Beta calculation for SNPs in PLINK
3.6 years ago by Sam ★ 4.7k
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1
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2.5k
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Answer: A: How to perform GWAS using BOLT-LMM iteratively for many phenotypes in bash
3.7 years ago by Sam ★ 4.7k
2
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1
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6.4k
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Answer: Answer: How to convert bfiles(bim/bed/fam) to PED and MAP file back?
2.2 years ago by Sam ★ 4.7k
2
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1
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3.5k
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Answer: A: Plink --merge-list generating error
3.7 years ago by Sam ★ 4.7k
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0
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1.2k
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Answer: A: GWAS data QC in PLINK
3.7 years ago by Sam ★ 4.7k
1
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0
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790
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Answer: A: liftOverPlink Syntax error
3.8 years ago by Sam ★ 4.7k
2
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0
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956
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Answer: A: Command to download "Height" information from UKB with ukbfetch
3.8 years ago by Sam ★ 4.7k
2
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1
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2.0k
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Answer: A: How to understand Instance and Array in UKB phenotype data
3.8 years ago by Sam ★ 4.7k
1
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0
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6.6k
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Answer: A: p value from multiple columns using R??
3.8 years ago by Sam ★ 4.7k
2
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1
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2.6k
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Answer: A: Validatingm Polygenic Risk Scores from PRSice
3.8 years ago by Sam ★ 4.7k
2
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2
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995
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Answer: A: Pathway and gene analysis based on GWAS results
3.8 years ago by Sam ★ 4.7k
5
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2
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5.5k
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Answer: A: Pruning GWAS summary statistics for LD
3.9 years ago by Sam ★ 4.7k
1
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0
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760
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Answer: A: ggplot low pvalues not detected
3.9 years ago by Sam ★ 4.7k
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1
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2.8k
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Answer: A: Specifying sample size from GWAS summary statistics for meta-analysis
3.9 years ago by Sam ★ 4.7k
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0
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1.3k
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Answer: A: PLINK : Problem with .assoc file
3.9 years ago by Sam ★ 4.7k
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0
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1.6k
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Answer: A: how to count the numbers of SNPs per sample?
4.0 years ago by Sam ★ 4.7k
0
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1
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5.3k
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Answer: A: relationship between PI_HAT and --king-cutoff coefficient?
4.0 years ago by Sam ★ 4.7k
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2
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3.8k
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Answer: A: PRS regression and covariates
4.0 years ago by Sam ★ 4.7k
3
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2
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7.5k
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Answer: Answer: How to find Standard Error (SE) values when not provided in GWAS summary stats?
2.8 years ago by Sam ★ 4.7k
1
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1
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1.8k
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Answer: A: how do I decide which individuals to remove in plink.genome in IBD analysis?
4.0 years ago by Sam ★ 4.7k
201 results • Page 2 of 5
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