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573
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Comment: Comment: cufflinks- cuffquant issue
18 hours ago by dsull ★ 7.8k
2
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0
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447
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Answer: Answer: Differential gene expression analysis between species using methods involving re
4 days ago by dsull ★ 7.8k
3
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0
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505
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Answer: Answer: DE analysis in nascent RNA Seq based on intron sequences
16 days ago by dsull ★ 7.8k
0
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1
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1.5k
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Comment: Comment: Differences between published differential gene expression results and own analy
4 weeks ago by dsull ★ 7.8k
1
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1
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1.5k
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Comment: Comment: Differences between published differential gene expression results and own analy
4 weeks ago by dsull ★ 7.8k
1
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1
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1.5k
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Comment: Comment: Differences between published differential gene expression results and own analy
4 weeks ago by dsull ★ 7.8k
0
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0
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12k
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Comment: Comment: Low Mapping Rate with Kallisto on RNA-seq Data
6 weeks ago by dsull ★ 7.8k
1
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0
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12k
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Comment: Comment: Low Mapping Rate with Kallisto on RNA-seq Data
6 weeks ago by dsull ★ 7.8k
1
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0
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12k
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Comment: Comment: Regarding the usage of raw vs filtered bc matrices
7 weeks ago by dsull ★ 7.8k
2
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1
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12k
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Comment: Comment: Regarding the usage of raw vs filtered bc matrices
7 weeks ago by dsull ★ 7.8k
1
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0
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12k
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Comment: Comment: Regarding the usage of raw vs filtered bc matrices
7 weeks ago by dsull ★ 7.8k
1
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1
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12k
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Answer: Answer: Regarding the usage of raw vs filtered bc matrices
7 weeks ago by dsull ★ 7.8k
0
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0
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578
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Comment: Comment: duplicate reads in RNAseq datasets
3 months ago by dsull ★ 7.8k
1
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0
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761
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Comment: Comment: Differential expression genes
3 months ago by dsull ★ 7.8k
1
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0
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1.3k
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Comment: Comment: Best Tool for Fast RNA-Seq Transcriptome Alignment to Extract Unmapped Reads
3 months ago by dsull ★ 7.8k
0
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1
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1.3k
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Answer: Answer: Best Tool for Fast RNA-Seq Transcriptome Alignment to Extract Unmapped Reads
4 months ago by dsull ★ 7.8k
1
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0
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2.3k
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Comment: Comment: Understanding STARsolo --soloStrand values and 10X scRNA-seq library structure
5 months ago by dsull ★ 7.8k
0
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1
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2.9k
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Comment: Comment: STAR aligner problem on local laptop
5 months ago by dsull ★ 7.8k
1
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1
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2.9k
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Comment: Comment: STAR aligner problem on local laptop
5 months ago by dsull ★ 7.8k
1
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0
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2.9k
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Comment: Comment: STAR aligner problem on local laptop
5 months ago by dsull ★ 7.8k
1
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2
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2.9k
views
Comment: Comment: STAR aligner problem on local laptop
5 months ago by dsull ★ 7.8k
0
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1
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2.9k
views
Answer: Answer: STAR aligner problem on local laptop
5 months ago by dsull ★ 7.8k
0
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0
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1.9k
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Comment: Comment: How common is it to split fastq files prior to bwa mem to increase parallelizati
5 months ago by dsull ★ 7.8k
0
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0
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1.9k
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Comment: Comment: How common is it to split fastq files prior to bwa mem to increase parallelizati
5 months ago by dsull ★ 7.8k
3
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2
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1.9k
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Answer: Answer: How common is it to split fastq files prior to bwa mem to increase parallelizati
5 months ago by dsull ★ 7.8k
1
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0
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1.0k
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Comment: Comment: differential exon usage from Salmon outputs
5 months ago by dsull ★ 7.8k
0
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1
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742
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Comment: Comment: STAR aligner - how is quality and correctness tested across builds/releases?
5 months ago by dsull ★ 7.8k
4
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0
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639
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Answer: Answer: Definitions for "differential expression" and "differential abundance" in RNA-se
5 months ago by dsull ★ 7.8k
0
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1
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1.6k
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Comment: Comment: Transcript identification and quantification
6 months ago by dsull ★ 7.8k
0
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2
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1.6k
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Comment: Comment: Transcript identification and quantification
6 months ago by dsull ★ 7.8k
1
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1
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1.6k
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Answer: Answer: Transcript identification and quantification
6 months ago by dsull ★ 7.8k
0
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0
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1.1k
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Comment: Comment: Pre-Made STAR Index for mm10 Mouse Genome
6 months ago by dsull ★ 7.8k
2
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1
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1.1k
views
Answer: Answer: Pre-Made STAR Index for mm10 Mouse Genome
6 months ago by dsull ★ 7.8k
1
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0
replies
1.5k
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Comment: Comment: STAR vs. Kallisto
6 months ago by dsull ★ 7.8k
1
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0
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1.5k
views
Comment: Comment: STAR vs. Kallisto
6 months ago by dsull ★ 7.8k
0
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1
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1.5k
views
Comment: Comment: STAR vs. Kallisto
6 months ago by dsull ★ 7.8k
0
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1
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1.5k
views
Comment: Comment: STAR vs. Kallisto
6 months ago by dsull ★ 7.8k
0
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0
replies
1.5k
views
Comment: Comment: STAR vs. Kallisto
6 months ago by dsull ★ 7.8k
4
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1
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1.5k
views
Answer: Answer: STAR vs. Kallisto
6 months ago by dsull ★ 7.8k
0
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0
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720
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Comment: Comment: Transcript level quantification and gene length scaling for rRNA depleted librar
6 months ago by dsull ★ 7.8k
2
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1
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1.5k
views
Comment: Comment: Why don't I see people calculating FPKM from normalized read counts?
6 months ago by dsull ★ 7.8k
0
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1
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829
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Answer: Answer: Single Nuclei RNA-Sequencing Analysis Without CellRanger
6 months ago by dsull ★ 7.8k
1
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0
replies
955
views
Answer: Answer: Parsing BAM file per cell from Smart-Seq2 dataset
7 months ago by dsull ★ 7.8k
0
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0
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865
views
Answer: Answer: Salmon RNA-Seq transcript quantification
7 months ago by dsull ★ 7.8k
0
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0
replies
567
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Comment: Comment: Kallisto alignment with HPC (SLURM)
8 months ago by dsull ★ 7.8k
2
votes
0
replies
2.9k
views
Comment: Comment: What is the current state of the beef against UMAP/tSNE in the context of sc tra
8 months ago by dsull ★ 7.8k
2
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1
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2.9k
views
Answer: Answer: What is the current state of the beef against UMAP/tSNE in the context of sc tra
8 months ago by dsull ★ 7.8k
0
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1
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1.8k
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Comment: Comment: Manual conversion of VCF genotypes to nucleotide sequence
8 months ago by dsull ★ 7.8k
1
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1
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1.8k
views
Answer: Answer: Manual conversion of VCF genotypes to nucleotide sequence
8 months ago by dsull ★ 7.8k
0
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0
replies
1.5k
views
Comment: Comment: Which zUMIs output to use for differential gene expression?
8 months ago by dsull ★ 7.8k
804 results • Page 1 of 17
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