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Answer: Answer: salmon for gene expression quantification
24 months ago by dsull ★ 7.8k
1
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1
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2.1k
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Answer: Answer: Quality filtering prior to pseudoalignment
24 months ago by dsull ★ 7.8k
3
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1
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1.7k
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Answer: Answer: Why am I getting different results with kallisto?
24 months ago by dsull ★ 7.8k
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1.7k
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Comment: Comment: Isaac aligner V4 genome aligner questions
2.0 years ago by dsull ★ 7.8k
2
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1
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2.0k
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Comment: Comment: RNA-Seq: Comparing Expression between Cancer Grades
2.0 years ago by dsull ★ 7.8k
1
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0
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1.9k
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Comment: Comment: Best way to use k-mers as a predictor in my neural network
2.0 years ago by dsull ★ 7.8k
1
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0
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768
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Answer: Answer: Intenger encoding versus one-hot encoding for chromosome as a predictor in a neu
2.0 years ago by dsull ★ 7.8k
0
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0
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1.1k
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Comment: Comment: Queries on Tophat and Cufflinks Data
2.0 years ago by dsull ★ 7.8k
1
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0
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924
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Comment: Comment: Converting STAR Gene-level alignment to TPM expression
2.0 years ago by dsull ★ 7.8k
0
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1
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1.1k
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Comment: Comment: Queries on Tophat and Cufflinks Data
2.0 years ago by dsull ★ 7.8k
1
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1
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3.0k
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Answer: Answer: Best command line tool for downloading sequencing reads
2.1 years ago by dsull ★ 7.8k
0
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1
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1.9k
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Comment: Comment: How to assign gene names after kallisto when I add GFP?
2.1 years ago by dsull ★ 7.8k
1
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0
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973
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Comment: Comment: GSEA analysis for phosphoproteins
2.1 years ago by dsull ★ 7.8k
0
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1
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973
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Answer: Answer: GSEA analysis for phosphoproteins
2.1 years ago by dsull ★ 7.8k
0
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1
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2.2k
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Comment: Comment: Kallisto abundance.tsv
2.1 years ago by dsull ★ 7.8k
1
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1
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1.9k
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Answer: Answer: How to assign gene names after kallisto when I add GFP?
2.1 years ago by dsull ★ 7.8k
0
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0
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2.8k
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Comment: Comment: Unmapped Reads in Kallisto
2.1 years ago by dsull ★ 7.8k
1
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0
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2.8k
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Answer: Answer: Unmapped Reads in Kallisto
2.1 years ago by dsull ★ 7.8k
0
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1
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2.8k
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Comment: Comment: Unmapped Reads in Kallisto
2.1 years ago by dsull ★ 7.8k
1
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0
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1.8k
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Comment: Comment: Frustrated with DEA results
2.1 years ago by dsull ★ 7.8k
4
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0
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1.8k
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Comment: Comment: Frustrated with DEA results
2.1 years ago by dsull ★ 7.8k
0
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0
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2.2k
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Comment: Comment: Low Alignment rate
2.1 years ago by dsull ★ 7.8k
2
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2
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2.2k
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Comment: Comment: Low Alignment rate
2.1 years ago by dsull ★ 7.8k
2
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1
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3.7k
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Comment: Comment: scRNAseq Differential expression analysis
2.1 years ago by dsull ★ 7.8k
2
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2
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3.7k
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Comment: Comment: scRNAseq Differential expression analysis
2.1 years ago by dsull ★ 7.8k
0
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0
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1.1k
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Comment: Comment: High amount of intronic/intergenic reads in SMARTer stranded total bulk RNAseq
2.1 years ago by dsull ★ 7.8k
4
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1
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3.7k
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Comment: Comment: scRNAseq Differential expression analysis
2.1 years ago by dsull ★ 7.8k
1
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0
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2.2k
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Comment: Comment: Importance of Data Structures for Bioinformatics?
2.1 years ago by dsull ★ 7.8k
2
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0
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1.9k
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Comment: Comment: Recommended way to normalize SmartSeq2 gene expression matrix to better match 10
2.1 years ago by dsull ★ 7.8k
0
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1
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2.7k
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Comment: Comment: RNA-seq for differential gene expression analysis with only one biological repli
2.1 years ago by dsull ★ 7.8k
1
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0
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1.2k
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Comment: Comment: Which reference genome, DNA or cDNA and why?
2.2 years ago by dsull ★ 7.8k
1
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0
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2.2k
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Comment: Comment: Can one sample t.test be used to determine statistical significance for log2FC v
2.2 years ago by dsull ★ 7.8k
6
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1
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5.7k
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Comment: Comment: Reproduce the article "The complete sequence of a human genome."
2.2 years ago by dsull ★ 7.8k
0
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1
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2.2k
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Answer: Answer: Can one sample t.test be used to determine statistical significance for log2FC v
2.2 years ago by dsull ★ 7.8k
0
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0
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3.1k
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Answer: Answer: Is Bioinformatics a Professional Degree?
2.2 years ago by dsull ★ 7.8k
2
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1
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980
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Answer: Answer: Is it possible to detect fusion genes by either stranded or unstranded RNA-seq?
2.2 years ago by dsull ★ 7.8k
1
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0
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1.3k
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Comment: Comment: Theoretical question about scRNA-seq
2.2 years ago by dsull ★ 7.8k
0
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1
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1.0k
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Answer: Answer: Extracting RNA sequence - single cell
2.2 years ago by dsull ★ 7.8k
0
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0
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889
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Comment: Comment: Single Cell Data Analysis
2.2 years ago by dsull ★ 7.8k
0
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1
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1.4k
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Comment: Comment: identify cell of origin from bulk RNAseq data
2.2 years ago by dsull ★ 7.8k
0
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0
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5.2k
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Comment: Comment: What to do about "outlier" values in volcano plot?
2.3 years ago by dsull ★ 7.8k
0
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1
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2.2k
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Comment: Comment: Read length for single -ended RNA seq data analysis
2.3 years ago by dsull ★ 7.8k
0
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0
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2.4k
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Comment: Comment: Where can I find a good RNA-seq dataset on cancer?
2.3 years ago by dsull ★ 7.8k
0
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1
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2.2k
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Comment: Comment: Read length for single -ended RNA seq data analysis
2.3 years ago by dsull ★ 7.8k
1
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1
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2.2k
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Comment: Comment: Read length for single -ended RNA seq data analysis
2.3 years ago by dsull ★ 7.8k
0
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0
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1.8k
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Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
2.3 years ago by dsull ★ 7.8k
1
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1
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1.8k
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Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
2.3 years ago by dsull ★ 7.8k
0
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1
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1.8k
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Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
2.3 years ago by dsull ★ 7.8k
1
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0
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2.2k
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Comment: Comment: Read length for single -ended RNA seq data analysis
2.3 years ago by dsull ★ 7.8k
0
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1
reply
936
views
Comment: Comment: Cuffdiff Output file question
2.3 years ago by dsull ★ 7.8k
804 results • Page 7 of 17
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