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Comment: Comment: Crispr-cas9 screen analysis mageck
2.6 years ago by dsull ★ 7.8k
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Comment: Comment: Aberrant splicing in bulk RNAseq
2.6 years ago by dsull ★ 7.8k
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Comment: Comment: Advice about building a computational project to investigate porphyrin’s roles i
2.6 years ago by dsull ★ 7.8k
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Comment: Comment: Kallisto bustools for scRNA-seq
2.6 years ago by dsull ★ 7.8k
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5.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
2.6 years ago by dsull ★ 7.8k
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816
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Answer: Answer: Is it possible to use pseudoalignments.bam to run rMATs?
2.6 years ago by dsull ★ 7.8k
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1.9k
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Comment: Comment: Kallisto bustools for scRNA-seq
2.6 years ago by dsull ★ 7.8k
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1.9k
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Comment: Comment: Kallisto bustools for scRNA-seq
2.6 years ago by dsull ★ 7.8k
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1.8k
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Answer: Answer: Confused on strandedness, what are antisense transcripts?
2.6 years ago by dsull ★ 7.8k
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1.6k
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Answer: Answer: Multiple samples and species with kallisto bus(tools)
2.6 years ago by dsull ★ 7.8k
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2.5k
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Answer: Answer: STARsolo
2.6 years ago by dsull ★ 7.8k
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2.4k
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Comment: Comment: STARsolo issue
2.6 years ago by dsull ★ 7.8k
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Comment: Comment: how to use tcga website with nmf
2.7 years ago by dsull ★ 7.8k
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7.2k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.7 years ago by dsull ★ 7.8k
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1
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7.2k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.7 years ago by dsull ★ 7.8k
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1
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1.9k
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Answer: Answer: kallisto -s o error
2.7 years ago by dsull ★ 7.8k
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4.1k
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Comment: Comment: 10X V3 library with only one fastq file
2.7 years ago by dsull ★ 7.8k
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983
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Answer: Answer: Do indexes made with cDNA fasta file contain only mRNAs?
2.7 years ago by dsull ★ 7.8k
6
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1.8k
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Answer: Answer: Question about aggregating p values from different DE analysis methods for the s
2.7 years ago by dsull ★ 7.8k
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0
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11k
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Comment: Comment: Get TPM from RNA counts and gene length?
2.7 years ago by dsull ★ 7.8k
4
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2
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7.2k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.7 years ago by dsull ★ 7.8k
1
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0
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7.2k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.7 years ago by dsull ★ 7.8k
0
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0
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7.2k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.7 years ago by dsull ★ 7.8k
1
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2
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7.2k
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Answer: Answer: How do one analyze data from SMART-Seq stranded kit (v4)?
2.7 years ago by dsull ★ 7.8k
1
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0
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11k
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Comment: Comment: Get TPM from RNA counts and gene length?
2.7 years ago by dsull ★ 7.8k
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0
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1.3k
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Comment: Comment: How to do differential expression without having replicates
2.7 years ago by dsull ★ 7.8k
1
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1
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5.5k
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Comment: Comment: Aberrant splicing in bulk RNAseq
2.7 years ago by dsull ★ 7.8k
1
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1
reply
5.5k
views
Comment: Comment: Aberrant splicing in bulk RNAseq
2.7 years ago by dsull ★ 7.8k
3
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5.0k
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Comment: Comment: What are Differentially Expressed Genes ?!!
2.7 years ago by dsull ★ 7.8k
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1.6k
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Comment: Comment: How to summarize the expression of a gene when having expression data from diffe
2.7 years ago by dsull ★ 7.8k
5
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1
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2.0k
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Answer: Answer: Tools/pipeline for analysis of smart-seq3 data
2.8 years ago by dsull ★ 7.8k
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1.4k
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Answer: Answer: Can I add TPM values of Isoforms of the same gene to get total gene expression?
2.8 years ago by dsull ★ 7.8k
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0
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5.8k
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Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
2.8 years ago by dsull ★ 7.8k
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0
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5.8k
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Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
2.8 years ago by dsull ★ 7.8k
0
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0
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1.7k
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Comment: Comment: Is it possible to convert transcript-level to gene-level dataset to use it in DE
2.8 years ago by dsull ★ 7.8k
1
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1
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1.7k
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Answer: Answer: Is it possible to convert transcript-level to gene-level dataset to use it in DE
2.8 years ago by dsull ★ 7.8k
2
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0
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887
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Answer: Answer: Circular deBuijn Graph
2.8 years ago by dsull ★ 7.8k
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2.4k
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Comment: Comment: How to get transcriptome reference?
2.9 years ago by dsull ★ 7.8k
1
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0
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2.4k
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Answer: Answer: How to get transcriptome reference?
2.9 years ago by dsull ★ 7.8k
1
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1
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3.4k
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Comment: Comment: downloading raw scRNA seq data from NCBI
2.9 years ago by dsull ★ 7.8k
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0
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3.4k
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Comment: Comment: downloading raw scRNA seq data from NCBI
2.9 years ago by dsull ★ 7.8k
0
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3.4k
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Comment: Comment: A Computer Scientist who wants to start Bioinformatics
2.9 years ago by dsull ★ 7.8k
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0
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2.0k
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Comment: Comment: is there any tool for SRA metadata analysis?
2.9 years ago by dsull ★ 7.8k
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1
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2.1k
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Comment: Comment: Issues with chromosome file in kallisto
2.9 years ago by dsull ★ 7.8k
2
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1
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1.3k
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Answer: Answer: Does the bootstrap in kallisto affect the BAM files?
2.9 years ago by dsull ★ 7.8k
1
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1
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2.1k
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Answer: Answer: Issues with chromosome file in kallisto
2.9 years ago by dsull ★ 7.8k
1
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1
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2.0k
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Comment: Comment: is there any tool for SRA metadata analysis?
2.9 years ago by dsull ★ 7.8k
2
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1
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1.2k
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Answer: Answer: Are ther any bulk RNAseq pipeline recommend which including the downstream funct
2.9 years ago by dsull ★ 7.8k
1
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0
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1.5k
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Comment: Comment: Sleuth analysis with only using Kallisto abundance.tsv files no HDF5 files
2.9 years ago by dsull ★ 7.8k
0
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0
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2.2k
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Comment: Comment: FPKM file differentilly gene anaylsis
2.9 years ago by dsull ★ 7.8k
804 results • Page 9 of 17
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