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Comment: Comment: How should I make kallisto indexes?
18 hours ago by dsull ★ 5.9k
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322
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Comment: Comment: How should I make kallisto indexes?
20 hours ago by dsull ★ 5.9k
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227
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Comment: Comment: High Malat-1 expression in single cell data
21 hours ago by dsull ★ 5.9k
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320
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Comment: Comment: What does it mean single base resolution in sequencing?
21 hours ago by dsull ★ 5.9k
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320
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Comment: Comment: What does it mean single base resolution in sequencing?
1 day ago by dsull ★ 5.9k
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1.6k
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Comment: Comment: NGS forensics: how to know if data is fabricated
2 days ago by dsull ★ 5.9k
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1
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1.6k
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Comment: Comment: NGS forensics: how to know if data is fabricated
2 days ago by dsull ★ 5.9k
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656
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Comment: Comment: Heatmap and rna-seq
3 days ago by dsull ★ 5.9k
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474
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Comment: Comment: To get p-values for the TPM
5 days ago by dsull ★ 5.9k
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474
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Comment: Comment: To get p-values for the TPM
6 days ago by dsull ★ 5.9k
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1
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474
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Comment: Comment: Is it Acceptable to Have Uniform Quality Scores in a FASTQ File?
6 days ago by dsull ★ 5.9k
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215
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Comment: Comment: from row count to tpm
7 days ago by dsull ★ 5.9k
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190
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Comment: Comment: Help/Direction Needed for Data Analysis of RNA
13 days ago by dsull ★ 5.9k
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521
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Comment: Comment: STARsolo ; Reads are NOT mapped to transcriptome
19 days ago by dsull ★ 5.9k
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1
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341
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Comment: Comment: How to to establish haplotype-specific gene expression levels
20 days ago by dsull ★ 5.9k
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274
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Comment: Comment: rRNA depletion of RIP-seq samples
20 days ago by dsull ★ 5.9k
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1
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209
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Comment: Comment: In need of help with my RNA velocity trajectory inference pipeline!
21 days ago by dsull ★ 5.9k
1
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0
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268
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Comment: Comment: Removing adapters in all the RNAseq samples regardless if they have or not, is i
26 days ago by dsull ★ 5.9k
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491
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Comment: Comment: Installing Cell Ranger
28 days ago by dsull ★ 5.9k
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396
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Comment: Comment: DESeq2 and normalization
4 weeks ago by dsull ★ 5.9k
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568
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Comment: Comment: STAR aligner options
4 weeks ago by dsull ★ 5.9k
1
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852
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Comment: Comment: Only one read per run - Trying to use CellRangerv7
4 weeks ago by dsull ★ 5.9k
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1
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568
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Comment: Comment: STAR aligner options
4 weeks ago by dsull ★ 5.9k
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7.1k
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Comment: Comment: Differences between SMART-seq2, SMART-seq3, and 10x
5 weeks ago by dsull ★ 5.9k
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1
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7.1k
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Comment: Comment: Differences between SMART-seq2, SMART-seq3, and 10x
5 weeks ago by dsull ★ 5.9k
1
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1
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723
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Comment: Comment: cutadapt not trimming all adapters in PE Illumina sequencing
5 weeks ago by dsull ★ 5.9k
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238
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Comment: Comment: DEG (Differential expression gene) analysis
6 weeks ago by dsull ★ 5.9k
3
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1
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372
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Comment: Comment: Average expression of a sample in single-cell data
6 weeks ago by dsull ★ 5.9k
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318
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Comment: Comment: RNA-seq bam file normalization
7 weeks ago by dsull ★ 5.9k
2
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367
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Comment: Comment: How I should set `STAR` parameters to keep all the intronic reads?
8 weeks ago by dsull ★ 5.9k
1
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1
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629
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Comment: Comment: Huge decrease of BUS records using bustools
9 weeks ago by dsull ★ 5.9k
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1
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273
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Comment: Comment: Why does Phred+ encoding changes after trimming fastq files??
9 weeks ago by dsull ★ 5.9k
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0
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582
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Comment: Comment: Making PCA plot using variance instead of counts on Sleuth (plot_pca)
9 weeks ago by dsull ★ 5.9k
2
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0
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495
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Comment: Comment: How does kallisto handle multi mapped reads?
9 weeks ago by dsull ★ 5.9k
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2
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495
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Comment: Comment: How does kallisto handle multi mapped reads?
9 weeks ago by dsull ★ 5.9k
0
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1
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565
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Comment: Comment: Differential expression analysis with very high duplication rate
11 weeks ago by dsull ★ 5.9k
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1
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455
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Comment: Comment: How to exclude sex-dependent genes from RNASEQ?
12 weeks ago by dsull ★ 5.9k
1
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0
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455
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Comment: Comment: How to exclude sex-dependent genes from RNASEQ?
12 weeks ago by dsull ★ 5.9k
1
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1
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601
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Comment: Comment: Why employ normalization methods, and how can they be utilized in DEG analysis?
12 weeks ago by dsull ★ 5.9k
2
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1
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621
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Comment: Comment: RNA seq, correlation, gene expression, STAR count
3 months ago by dsull ★ 5.9k
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0
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1.1k
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Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by dsull ★ 5.9k
2
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1
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1.1k
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Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by dsull ★ 5.9k
0
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0
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142k
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Comment: Comment: The Biostar Handbook. A bioinformatics e-book for beginners.
3 months ago by dsull ★ 5.9k
0
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0
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956
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 5.9k
1
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1
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956
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 5.9k
0
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1
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956
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 5.9k
0
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1
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956
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 5.9k
2
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2
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1.0k
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Comment: Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
3 months ago by dsull ★ 5.9k
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1
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1.0k
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Comment: Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
3 months ago by dsull ★ 5.9k
0
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0
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 5.9k
420 results • Page 1 of 9
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