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Comment:
Comment: Isaac aligner V4 genome aligner questions
5 months ago by
dsull
★ 5.8k
2
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1
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759
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Comment:
Comment: RNA-Seq: Comparing Expression between Cancer Grades
5 months ago by
dsull
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1
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0
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672
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Comment:
Comment: Best way to use k-mers as a predictor in my neural network
5 months ago by
dsull
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1
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0
replies
312
views
Answer:
Answer: Intenger encoding versus one-hot encoding for chromosome as a predictor in a neu
6 months ago by
dsull
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0
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0
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499
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Comment:
Comment: Queries on Tophat and Cufflinks Data
6 months ago by
dsull
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1
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0
replies
412
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Comment:
Comment: Converting STAR Gene-level alignment to TPM expression
6 months ago by
dsull
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0
votes
1
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499
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Comment:
Comment: Queries on Tophat and Cufflinks Data
6 months ago by
dsull
★ 5.8k
1
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1
reply
1.0k
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Answer:
Answer: Best command line tool for downloading sequencing reads
6 months ago by
dsull
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0
votes
1
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680
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Comment:
Comment: How to assign gene names after kallisto when I add GFP?
6 months ago by
dsull
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1
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0
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480
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Comment:
Comment: GSEA analysis for phosphoproteins
6 months ago by
dsull
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1
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480
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Answer:
Answer: GSEA analysis for phosphoproteins
6 months ago by
dsull
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0
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1
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895
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Comment:
Comment: Kallisto abundance.tsv
6 months ago by
dsull
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1
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1
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680
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Answer:
Answer: How to assign gene names after kallisto when I add GFP?
6 months ago by
dsull
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0
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0
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1.8k
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Comment:
Comment: Unmapped Reads in Kallisto
7 months ago by
dsull
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1
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0
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1.8k
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Answer:
Answer: Unmapped Reads in Kallisto
7 months ago by
dsull
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0
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1
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1.8k
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Comment:
Comment: Unmapped Reads in Kallisto
7 months ago by
dsull
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1
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0
replies
814
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Comment:
Comment: Frustrated with DEA results
7 months ago by
dsull
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4
votes
0
replies
814
views
Comment:
Comment: Frustrated with DEA results
7 months ago by
dsull
★ 5.8k
0
votes
0
replies
903
views
Comment:
Comment: Low Alignment rate
7 months ago by
dsull
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2
votes
2
replies
903
views
Comment:
Comment: Low Alignment rate
7 months ago by
dsull
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1
vote
1
reply
1.4k
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Comment:
Comment: scRNAseq Differential expression analysis
7 months ago by
dsull
★ 5.8k
1
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2
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1.4k
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Comment:
Comment: scRNAseq Differential expression analysis
7 months ago by
dsull
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0
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0
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541
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Comment:
Comment: High amount of intronic/intergenic reads in SMARTer stranded total bulk RNAseq
7 months ago by
dsull
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3
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1
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1.4k
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Comment:
Comment: scRNAseq Differential expression analysis
7 months ago by
dsull
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1
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0
replies
907
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Comment:
Comment: Importance of Data Structures for Bioinformatics?
7 months ago by
dsull
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2
votes
0
replies
917
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Comment:
Comment: Recommended way to normalize SmartSeq2 gene expression matrix to better match 10
7 months ago by
dsull
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0
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1
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1.2k
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Comment:
Comment: RNA-seq for differential gene expression analysis with only one biological repli
7 months ago by
dsull
★ 5.8k
1
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0
replies
559
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Comment:
Comment: Which reference genome, DNA or cDNA and why?
7 months ago by
dsull
★ 5.8k
1
vote
0
replies
1.1k
views
Comment:
Comment: Can one sample t.test be used to determine statistical significance for log2FC v
7 months ago by
dsull
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6
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1
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3.8k
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Comment:
Comment: Reproduce the article "The complete sequence of a human genome."
7 months ago by
dsull
★ 5.8k
0
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1
reply
1.1k
views
Answer:
Answer: Can one sample t.test be used to determine statistical significance for log2FC v
8 months ago by
dsull
★ 5.8k
0
votes
0
replies
1.4k
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Answer:
Answer: Is Bioinformatics a Professional Degree?
8 months ago by
dsull
★ 5.8k
2
votes
1
reply
464
views
Answer:
Answer: Is it possible to detect fusion genes by either stranded or unstranded RNA-seq?
8 months ago by
dsull
★ 5.8k
1
vote
0
replies
591
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Comment:
Comment: Theoretical question about scRNA-seq
8 months ago by
dsull
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0
votes
1
reply
532
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Answer:
Answer: Extracting RNA sequence - single cell
8 months ago by
dsull
★ 5.8k
0
votes
0
replies
503
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Comment:
Comment: Single Cell Data Analysis
8 months ago by
dsull
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0
votes
1
reply
667
views
Comment:
Comment: identify cell of origin from bulk RNAseq data
8 months ago by
dsull
★ 5.8k
0
votes
0
replies
1.9k
views
Comment:
Comment: What to do about "outlier" values in volcano plot?
8 months ago by
dsull
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0
votes
1
reply
1.1k
views
Comment:
Comment: Read length for single -ended RNA seq data analysis
9 months ago by
dsull
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0
votes
0
replies
1.6k
views
Comment:
Comment: Where can I find a good RNA-seq dataset on cancer?
9 months ago by
dsull
★ 5.8k
0
votes
1
reply
1.1k
views
Comment:
Comment: Read length for single -ended RNA seq data analysis
9 months ago by
dsull
★ 5.8k
1
vote
1
reply
1.1k
views
Comment:
Comment: Read length for single -ended RNA seq data analysis
9 months ago by
dsull
★ 5.8k
0
votes
0
replies
843
views
Comment:
Comment: Should we assume UMI-based scRNAseq data is not compositional?
9 months ago by
dsull
★ 5.8k
1
vote
1
reply
843
views
Comment:
Comment: Should we assume UMI-based scRNAseq data is not compositional?
9 months ago by
dsull
★ 5.8k
0
votes
1
reply
843
views
Comment:
Comment: Should we assume UMI-based scRNAseq data is not compositional?
9 months ago by
dsull
★ 5.8k
1
vote
0
replies
1.1k
views
Comment:
Comment: Read length for single -ended RNA seq data analysis
9 months ago by
dsull
★ 5.8k
0
votes
1
reply
511
views
Comment:
Comment: Cuffdiff Output file question
9 months ago by
dsull
★ 5.8k
1
vote
1
reply
894
views
Answer:
Answer: Problem creating salmon index
9 months ago by
dsull
★ 5.8k
1
vote
0
replies
968
views
Comment:
Comment: Why does R1 read only have length of 26 with 10X library prepration?
9 months ago by
dsull
★ 5.8k
0
votes
0
replies
495
views
Comment:
Comment: Differential gene expression pattern changes while using nuclear/unspliced count
9 months ago by
dsull
★ 5.8k
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