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Answer: Answer: Is there any tool that can search for a pattern (while allowing mismatch) in fas
7 months ago by dsull ★ 7.3k
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Comment: Comment: How to improve a bioinformatics study and paper so that it is not considered "to
7 months ago by dsull ★ 7.3k
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2.0k
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Answer: Answer: How to improve a bioinformatics study and paper so that it is not considered "to
7 months ago by dsull ★ 7.3k
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Answer: Answer: Fragment size of published single end RNAseq data
8 months ago by dsull ★ 7.3k
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977
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Comment: Comment: How do decide if a processed scRNA-seq data is read counts or UMI format ?
8 months ago by dsull ★ 7.3k
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Answer: Answer: kb count -x parameter - what are the three parts?
8 months ago by dsull ★ 7.3k
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1.4k
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Comment: Comment: 10X #3' RNA seq - How is strandedness determined?
8 months ago by dsull ★ 7.3k
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420
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Answer: Answer: I am getting an error with Kallisto Bustools wrapper (kb) command to create an i
8 months ago by dsull ★ 7.3k
2
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646
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Answer: Answer: Is the 10X multiome chemistry most similar similar to 10XV1, 10XV2, or 10XV3?
8 months ago by dsull ★ 7.3k
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2.3k
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Answer: Answer: RNA STAR and trimming
8 months ago by dsull ★ 7.3k
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1.6k
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Answer: Answer: Conversion of Gene Name to Ensembl ID
8 months ago by dsull ★ 7.3k
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2.3k
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Comment: Comment: RNA STAR and trimming
8 months ago by dsull ★ 7.3k
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982
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Comment: Comment: DESeq2 for DE analysis of proteins
8 months ago by dsull ★ 7.3k
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982
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Comment: Comment: DESeq2 for DE analysis of proteins
8 months ago by dsull ★ 7.3k
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982
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Answer: Answer: DESeq2 for DE analysis of proteins
8 months ago by dsull ★ 7.3k
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Comment: Comment: gene ids do not have corresponding valid gene names kallisto bus tools
8 months ago by dsull ★ 7.3k
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2.3k
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Comment: Comment: RNA STAR and trimming
8 months ago by dsull ★ 7.3k
2
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1
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702
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Answer: Answer: gene ids do not have corresponding valid gene names kallisto bus tools
8 months ago by dsull ★ 7.3k
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670
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Comment: Comment: indexing the drosophila genome for kallisto
8 months ago by dsull ★ 7.3k
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670
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Answer: Answer: indexing the drosophila genome for kallisto
8 months ago by dsull ★ 7.3k
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606
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Answer: Answer: STAR Index error
8 months ago by dsull ★ 7.3k
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3.4k
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Comment: Comment: Why it is not use UMIs for RNA-seq?
8 months ago by dsull ★ 7.3k
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546
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Comment: Comment: Changing existing identifiers in RNASeq data to gene names
8 months ago by dsull ★ 7.3k
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2.3k
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Comment: Comment: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
8 months ago by dsull ★ 7.3k
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928
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Comment: Comment: filter reads based on mapped length
9 months ago by dsull ★ 7.3k
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923
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Comment: Comment: Stuck on how to run STARsolo on paired cDNA RNA-Seq FASTQ files
9 months ago by dsull ★ 7.3k
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923
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Comment: Comment: Stuck on how to run STARsolo on paired cDNA RNA-Seq FASTQ files
9 months ago by dsull ★ 7.3k
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2
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1.0k
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Answer: Answer: Best way to create a custom reference for CellRanger when using a transgenic mou
9 months ago by dsull ★ 7.3k
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1
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933
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Comment: Comment: Why am I getting such a big difference in alignment rates in kallisto?
9 months ago by dsull ★ 7.3k
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527
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Answer: Answer: What does the name of a read mean? How to find its location in genome viewer?
9 months ago by dsull ★ 7.3k
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755
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Comment: Comment: Detecting a virus in RNA-Seq Data
9 months ago by dsull ★ 7.3k
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654
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Comment: Comment: Can I go from kallisto results to SEURAT directly
9 months ago by dsull ★ 7.3k
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446
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Comment: Comment: Hybrid ScRNA Seq genome (transcriptome
9 months ago by dsull ★ 7.3k
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571
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Comment: Comment: single nucleus RNA seq processing pipeline questions
9 months ago by dsull ★ 7.3k
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678
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Comment: Comment: Differential gene expression
9 months ago by dsull ★ 7.3k
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839
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Comment: Comment: Basic question about lncRNA identification
9 months ago by dsull ★ 7.3k
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863
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Comment: Comment: FASTQ header correction to remove .1 and .2 from paired end - SRA files
9 months ago by dsull ★ 7.3k
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605
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Comment: Comment: Best Kits for RNA extraction from different fish tissue for annotation and gene
9 months ago by dsull ★ 7.3k
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878
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Comment: Comment: Are there instutions that allow to use their hpc without charge?
9 months ago by dsull ★ 7.3k
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605
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Comment: Comment: Best Kits for RNA extraction from different fish tissue for annotation and gene
9 months ago by dsull ★ 7.3k
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16k
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Comment: Comment: log2 fold change in RNA-seq analysis
9 months ago by dsull ★ 7.3k
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2.6k
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Comment: Comment: High Malat-1 expression in single cell data
10 months ago by dsull ★ 7.3k
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924
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Answer: Answer: How to compute TPM normalized values for TCGA miRNA data?
10 months ago by dsull ★ 7.3k
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2.6k
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Comment: Comment: High Malat-1 expression in single cell data
10 months ago by dsull ★ 7.3k
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1.1k
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Comment: Comment: How does gene length effect the number of reads mapped
10 months ago by dsull ★ 7.3k
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2.6k
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Comment: Comment: High Malat-1 expression in single cell data
10 months ago by dsull ★ 7.3k
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1.1k
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Comment: Comment: How does gene length effect the number of reads mapped
10 months ago by dsull ★ 7.3k
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618
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Answer: Answer: RNA-seq data for deep learning classification
10 months ago by dsull ★ 7.3k
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2.9k
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Comment: Comment: What purposes can TPM values be used for?
10 months ago by dsull ★ 7.3k
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1.5k
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Comment: Comment: How should I make kallisto indexes?
10 months ago by dsull ★ 7.3k
762 results • Page 3 of 16
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