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Answer:
Answer: Is there any way to make p-value high if correlation has negative value?
2.4 years ago by
dsull
★ 5.9k
1
vote
1
reply
1.0k
views
Answer:
Answer: EM algorithm in Kallisto
2.6 years ago by
dsull
★ 5.9k
1
vote
0
replies
1.2k
views
Answer:
Answer: Download TCGA and GTEX data from Xena toilHub for (full genome but for 1 cancer
2.6 years ago by
dsull
★ 5.9k
9
votes
1
reply
7.1k
views
Answer:
Answer: Differences between SMART-seq2, SMART-seq3, and 10x
2.6 years ago by
dsull
★ 5.9k
3
votes
1
reply
2.1k
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Answer:
Answer: Analysis of shRNA/CRISPR screens in 2021
2.8 years ago by
dsull
★ 5.9k
1
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1
reply
4.4k
views
Answer:
Answer: understanding log2fold change of 0.31 and -0.25
2.8 years ago by
dsull
★ 5.9k
1
vote
0
replies
557
views
Answer:
Answer: Ways to mapping a transcriptome against a single gene
2.8 years ago by
dsull
★ 5.9k
0
votes
0
replies
2.4k
views
Answer:
Answer: the relationship of ATAC-seq and H3K27ac
2.8 years ago by
dsull
★ 5.9k
1
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0
replies
1.2k
views
Answer:
Answer: Interpretation of reads
2.9 years ago by
dsull
★ 5.9k
0
votes
1
reply
2.0k
views
Answer:
Answer: TCGA Sample barcode
2.9 years ago by
dsull
★ 5.9k
1
vote
1
reply
2.3k
views
Answer:
Answer: Kallisto bustools index
2.9 years ago by
dsull
★ 5.9k
2
votes
0
replies
1.2k
views
Answer:
Answer: Kallisto alignment method for single nuclei
2.9 years ago by
dsull
★ 5.9k
2
votes
1
reply
1.0k
views
Answer:
Answer: Where is the most up-to date TCGA clinic data?
3.0 years ago by
dsull
★ 5.9k
2
votes
0
replies
2.1k
views
Answer:
Answer: Normalization of RNA-seq data with Kallisto/Sleuth for comparisons across treatm
3.0 years ago by
dsull
★ 5.9k
2
votes
1
reply
1.2k
views
Answer:
Answer: anybody know what the 4 non-ACGUT characters are in Gencode 38 transcript file,
3.0 years ago by
dsull
★ 5.9k
0
votes
0
replies
792
views
Answer:
Answer: Using RPKM to compare gene expression between samples
3.0 years ago by
dsull
★ 5.9k
0
votes
0
replies
1.9k
views
Answer:
A: Why full-length sequencing is not possible in UMI-based methods in single-cell R
3.2 years ago by
dsull
★ 5.9k
0
votes
2
replies
1.5k
views
Answer:
A: TCGA expression dataset handling
3.2 years ago by
dsull
★ 5.9k
0
votes
2
replies
882
views
Answer:
A: How to analyze ChIP-seq with pipline?
3.2 years ago by
dsull
★ 5.9k
3
votes
1
reply
1.2k
views
Answer:
A: RNA-Seq Data analysis
3.3 years ago by
dsull
★ 5.9k
2
votes
0
replies
657
views
Answer:
A: Gene size correction for small RNA
3.3 years ago by
dsull
★ 5.9k
1
vote
1
reply
1.2k
views
Answer:
A: Kallisto single cell velocity tutorial question
3.5 years ago by
dsull
★ 5.9k
2
votes
0
replies
1.6k
views
Answer:
A: Can anyone suggest me the recent and best pipeline for RNA-Seq data analysis
3.6 years ago by
dsull
★ 5.9k
3
votes
1
reply
1.3k
views
Answer:
A: Building a cDNA and intron index for Kallisto/Bustools Single Cell Velocity for
3.6 years ago by
dsull
★ 5.9k
4
votes
0
replies
4.7k
views
Answer:
C: [RNA-Seq] STAR vs Subread
3.6 years ago by
dsull
★ 5.9k
0
votes
1
reply
1.6k
views
Answer:
A: MAGeCK vs MWU CRISPR Screen Tests
3.7 years ago by
dsull
★ 5.9k
1
vote
0
replies
981
views
Answer:
A: How to deal with "///" separator in Geo2r when loading data to enrichr
3.7 years ago by
dsull
★ 5.9k
1
vote
1
reply
886
views
Answer:
A: help clarify ways to measure coverage in RNA-Seq libraries
3.7 years ago by
dsull
★ 5.9k
2
votes
1
reply
1.5k
views
Answer:
A: Salmon with Sleuth
3.7 years ago by
dsull
★ 5.9k
1
vote
0
replies
794
views
Answer:
A: RNA-seq Data for Kidney Tissue
3.8 years ago by
dsull
★ 5.9k
0
votes
1
reply
3.7k
views
Answer:
A: How to compute Spearman correlation between numeric and non-numeric data variabl
3.8 years ago by
dsull
★ 5.9k
3
votes
0
replies
1.3k
views
Answer:
A: RNA seq data analysis
3.8 years ago by
dsull
★ 5.9k
1
vote
1
reply
1.2k
views
Answer:
A: Did TCGA consortium recommend any best practice guideline for cross-sample RNAse
3.8 years ago by
dsull
★ 5.9k
2
votes
0
replies
2.9k
views
Answer:
A: Blood Derived Normal RNA_seq samples TCGA
3.9 years ago by
dsull
★ 5.9k
0
votes
0
replies
1.1k
views
Answer:
A: Data extraction from GEO onto R
3.9 years ago by
dsull
★ 5.9k
3
votes
2
replies
3.2k
views
Answer:
A: fGSEA with preranked data based off gene expression using DeSeq2
3.9 years ago by
dsull
★ 5.9k
1
vote
0
replies
580
views
Answer:
A: RNA-Seq results comparison
3.9 years ago by
dsull
★ 5.9k
3
votes
0
replies
1.6k
views
Answer:
A: Genes vs transcripts in RNA-seq analysis
3.9 years ago by
dsull
★ 5.9k
0
votes
0
replies
948
views
Answer:
A: CUFFLINKS FROM TOPHAT2 STUFF...
3.9 years ago by
dsull
★ 5.9k
3
votes
1
reply
3.2k
views
Answer:
A: DESeq2 rlogTransformed count data have negative values. Why are they negative?
3.9 years ago by
dsull
★ 5.9k
0
votes
0
replies
927
views
Answer:
A: Directionality of GSEA result Vs log2FC
3.9 years ago by
dsull
★ 5.9k
2
votes
0
replies
2.9k
views
Answer:
A: Enrichr Result analysis interpretation ?
3.9 years ago by
dsull
★ 5.9k
3
votes
0
replies
1.3k
views
Answer:
A: Effect of sample size on log fold change in gene expression analysis
4.0 years ago by
dsull
★ 5.9k
1
vote
0
replies
1.4k
views
Answer:
A: correct order of cut off and normalization in RNAseq data
4.0 years ago by
dsull
★ 5.9k
6
votes
0
replies
6.1k
views
Answer:
A: How to interpret "pseudo count" in gene expression data handling context?
4.0 years ago by
dsull
★ 5.9k
6
votes
2
replies
3.6k
views
Answer:
C: Why NB distribution is preferred in RNA-Seq while normal distribution is preferr
4.0 years ago by
dsull
★ 5.9k
3
votes
1
reply
5.4k
views
Answer:
A: Should I normalize read counts if I want to run plotPCA?
4.0 years ago by
dsull
★ 5.9k
2
votes
0
replies
945
views
Answer:
A: scRNA rising in popularity, what comes next?
4.1 years ago by
dsull
★ 5.9k
0
votes
0
replies
913
views
Answer:
C: transcription factor from list of genes
4.1 years ago by
dsull
★ 5.9k
0
votes
0
replies
1.5k
views
Answer:
A: Enrichr significance, q value is always >0.05?
4.1 years ago by
dsull
★ 5.9k
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