User: cristian

gravatar for cristian
cristian90
Reputation:
90
Status:
Trusted
Location:
Last seen:
2 months, 3 weeks ago
Joined:
1 year, 10 months ago
Email:
c*******@cristian-riccio.ch

Posts by cristian

<prev • 170 results • page 1 of 17 • next >
0
votes
5
answers
28k
views
5
answers
Comment: C: Extract User Defined Region From An Fasta File
... Can you do this with Rsamtools or another Bioconductor packages? ...
written 6 months ago by cristian90
0
votes
6
answers
690
views
6
answers
Answer: A: how to compare 1st row and 1st column value with rest of the row values in R?
... Hi, Can I recommend this course? http://cambiotraining.github.io/r-intro/ ...
written 8 months ago by cristian90
0
votes
6
answers
690
views
6
answers
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
... It's also marking the heterozygotes. I think table 2 is as you wish. ...
written 8 months ago by cristian90
0
votes
6
answers
690
views
6
answers
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
... The code above is now exporting the 3 columns into a single file. ...
written 8 months ago by cristian90
0
votes
6
answers
690
views
6
answers
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
... What does this mean: ' i want to check whether P1 and P2 match for M1 or not' ? Do you only want to export columns where both parents are homozygous? ...
written 9 months ago by cristian90
0
votes
6
answers
690
views
6
answers
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
... How do you define 'between them' when the parents are not homozygous or the data not available, M3 and M2 respectively. ...
written 9 months ago by cristian90
0
votes
6
answers
690
views
6
answers
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
... Sorry, can you explain the problem more clearly? Do you want to output columns M2 and M3 in the first step? Also, I still haven't sorted out the heterozygote bit. I am on it. ...
written 9 months ago by cristian90
0
votes
0
answers
617
views
0
answers
Comment: C: How to rename chromosome names in GTF file?
... Maybe you can consolidate your comments into an answer and I can accept it? ...
written 9 months ago by cristian90
0
votes
0
answers
617
views
0
answers
Comment: C: How to rename chromosome names in GTF file?
... Correct guess, thanks. It worked now. So you made use of the fact that the GTF file just had 'CHROMOSOME_' prepended to all my FASTA chromosome names, right? Do you mind explaining this: 's/CHROMOSOME_//g' ? ...
written 9 months ago by cristian90
0
votes
6
answers
690
views
6
answers
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
... I edited my answer in my first comment. Check it out and tell me where you got. There were mistakes in my first code. For example, when you fetch a column: df[['column name']] the i-th value of that column: df[['column name']][i] There are brackets missing in your blue code. ...
written 9 months ago by cristian90

Latest awards to cristian

Popular Question 3 months ago, created a question with more than 1,000 views. For Problem running Trinity
Popular Question 3 months ago, created a question with more than 1,000 views. For Problem running Trinity
Popular Question 4 months ago, created a question with more than 1,000 views. For Problem running Trinity
Popular Question 8 months ago, created a question with more than 1,000 views. For Problem running Trinity
Voter 9 months ago, voted more than 100 times.
Scholar 9 months ago, created an answer that has been accepted. For A: Can I open a BAM file without a header in Rsamtools?
Popular Question 9 months ago, created a question with more than 1,000 views. For Problem running Trinity
Scholar 10 months ago, created an answer that has been accepted. For A: Can I open a BAM file without a header in Rsamtools?
Teacher 10 months ago, created an answer with at least 3 up-votes. For A: Error with hera
Scholar 10 months ago, created an answer that has been accepted. For A: Can I open a BAM file without a header in Rsamtools?
Centurion 10 months ago, created 100 posts.
Scholar 11 months ago, created an answer that has been accepted. For A: Can I open a BAM file without a header in Rsamtools?
Scholar 11 months ago, created an answer that has been accepted. For A: Can I open a BAM file without a header in Rsamtools?
Scholar 12 months ago, created an answer that has been accepted. For A: Can I open a BAM file without a header in Rsamtools?
Scholar 12 months ago, created an answer that has been accepted. For A: Can I open a BAM file without a header in Rsamtools?
Supporter 12 months ago, voted at least 25 times.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1987 users visited in the last hour