Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
4
votes
3
replies
399
views
How to download a genome assembly from the NCBI website?
genome
updated 5 months ago by 127k • written 5 months ago by ▴ 350
4
votes
10
replies
5.2k
views
Running multiQC on more than one file Log.final.out from STAR
multiqc star
updated 8 months ago by • 0 • written 6.5 years ago by ▴ 350
65
votes
17
replies
30k
views
12 follow
Transform a GTF file into a data frame in R
R RNA-Seq GTF
updated 4 weeks ago by 38k • written 5.5 years ago by ▴ 350
1
vote
4
replies
2.9k
views
How can I get a rdotplot file in lastz?
lastz r rdotplot dotplot genomic alignment
updated 2.8 years ago by 20 • written 5.6 years ago by ▴ 350
4
votes
1
reply
3.5k
views
How can I input a BAM file to the samtools mpileup command without using a text file?
samtools mpileup bam variant calling
updated 2.9 years ago by 20 • written 6.1 years ago by ▴ 350
0
votes
1
reply
8.9k
views
Comment: C: Mismatch and Indel statistics from BAM/SAM file
3.8 years ago by biomagician ▴ 350
0
votes
0
replies
18k
views
Comment: C: What is the right illumina universal adapter sequence for trimming paired-end re
3.9 years ago by biomagician ▴ 350
2
votes
1
reply
1.2k
views
pacbio db and las files
db pacbio las next-gen
updated 8 days ago by 38k • written 5.8 years ago by ▴ 350
8
votes
7
replies
5.7k
views
How to rename chromosome names in GTF file?
GTF FASTA annotation genome
updated 4.5 years ago by 20 • written 5.5 years ago by ▴ 350
0
votes
0
replies
2.4k
views
Using the align() function of the Rsubread package; error: unrecognized option `--gtfFeature'
rsubread subread ngs next-gen seq alignment
updated 4.6 years ago by 38k • written 6.0 years ago by ▴ 350
8
votes
8
replies
3.1k
views
bwa mem misaligns my contigs to the reference by a few bases
bwa bwt bwa mem contig alignment
updated 4.8 years ago by 20 • written 5.7 years ago by ▴ 350
4
votes
4
replies
2.4k
views
Is there an R function that transforms a decimal SAM FLAG into a list of strings?
R SAM FLAG alignment format bam
updated 4.9 years ago by ▴ 10 • written 5.5 years ago by ▴ 350
5
votes
16
replies
6.6k
views
Problem with topGO: GO term enrichment analysis
go topgo bioconductor r error
updated 5.2 years ago by ▴ 10 • written 5.6 years ago by ▴ 350
0
votes
0
replies
65k
views
Comment: C: Extract User Defined Region From An Fasta File
5.3 years ago by biomagician ▴ 350
0
votes
0
replies
5.5k
views
Answer: A: how to compare 1st row and 1st column value with rest of the row values in R?
5.5 years ago by biomagician ▴ 350
0
votes
2
replies
2.6k
views
Problem installing quiver
quiver pacbio polishing arrow
updated 5.5 years ago by • 0 • written 5.8 years ago by ▴ 350
0
votes
0
replies
5.5k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
5.5 years ago by biomagician ▴ 350
0
votes
1
reply
5.5k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
5.5k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
5.5k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
5.5k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
5.5k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
5.7k
views
Comment: C: How to rename chromosome names in GTF file?
5.5 years ago by biomagician ▴ 350
0
votes
1
reply
5.7k
views
Comment: C: How to rename chromosome names in GTF file?
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
5.5k
views
Comment: C: how to compare 1st row and 1st column value with rest of the row values in R?
5.5 years ago by biomagician ▴ 350
0
votes
2
replies
5.7k
views
Comment: C: How to rename chromosome names in GTF file?
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
30k
views
Comment: C: Transform a GTF file into a data frame in R
5.5 years ago by biomagician ▴ 350
3
votes
1
reply
30k
views
Answer: A: Transform a GTF file into a data frame in R
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
30k
views
Comment: C: Transform a GTF file into a data frame in R
5.5 years ago by biomagician ▴ 350
0
votes
0
replies
30k
views
Comment: C: Transform a GTF file into a data frame in R
5.5 years ago by biomagician ▴ 350
3
votes
1
reply
4.7k
views
Import the quality scores from a FASTQ file in Python 3 Biopython
python3 fastq biopython quality fasta
updated 5.6 years ago by 5.7k • written 5.6 years ago by ▴ 350
0
votes
0
replies
2.0k
views
Comment: C: Mauve, meaning of coulours and red bars and green lines
5.6 years ago by biomagician ▴ 350
1
vote
2
replies
2.0k
views
Mauve, meaning of coulours and red bars and green lines
mauve alignment colour genomes
5.6 years ago by biomagician ▴ 350
0
votes
1
reply
2.9k
views
Comment: C: How can I get a rdotplot file in lastz?
5.6 years ago by biomagician ▴ 350
0
votes
0
replies
2.9k
views
Comment: C: How can I get a rdotplot file in lastz?
5.6 years ago by biomagician ▴ 350
0
votes
0
replies
1.4k
views
Difference between unlocalized and unplaced fragments
chromosomer scaffolding scaffold contig
5.6 years ago by biomagician ▴ 350
0
votes
0
replies
2.7k
views
Comment: C: Blastn error, database creation problem, BLAST
5.6 years ago by biomagician ▴ 350
5
votes
3
replies
2.7k
views
Blastn error, database creation problem, BLAST
blast blastn database makeblastdb
updated 5.6 years ago by 34k • written 5.6 years ago by ▴ 350
0
votes
0
replies
6.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
5.6 years ago by biomagician ▴ 350
0
votes
1
reply
6.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
5.6 years ago by biomagician ▴ 350
0
votes
0
replies
6.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
5.6 years ago by biomagician ▴ 350
0
votes
1
reply
6.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
5.6 years ago by biomagician ▴ 350
0
votes
1
reply
6.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
5.6 years ago by biomagician ▴ 350
0
votes
0
replies
6.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
5.6 years ago by biomagician ▴ 350
0
votes
2
replies
6.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
5.6 years ago by biomagician ▴ 350
0
votes
0
replies
6.6k
views
Comment: C: Problem with topGO: GO term enrichment analysis
5.6 years ago by biomagician ▴ 350
0
votes
1
reply
2.8k
views
Comment: C: Tool to analysis GO term enrichment in C. elegans
5.6 years ago by biomagician ▴ 350
0
votes
0
replies
2.8k
views
Comment: C: Tool to analysis GO term enrichment in C. elegans
5.6 years ago by biomagician ▴ 350
0
votes
1
reply
3.8k
views
Comment: C: Problem installing Rgraphviz in R
5.6 years ago by biomagician ▴ 350
0
votes
0
replies
3.8k
views
Comment: C: Problem installing Rgraphviz in R
5.6 years ago by biomagician ▴ 350
170 results • Page 1 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6