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Showing :
answers
2
votes
1
reply
2.7k
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Answer:
A: Fetching Genbank Assembly IDs with protein
4.3 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.9k
views
Answer:
A: How to parse sequences from a gbk file, based on the coordinates specified in gi
4.3 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
2.3k
views
Answer:
A: How to get GTF file for Rousettus_aegyptiacus?
4.3 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
1.6k
views
Answer:
A: How to download fasta files of a particular genus bacteria available in NCBI?
4.4 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
2.5k
views
Answer:
A: Finding the parent gene of pseudogene in mouse
4.4 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
7.2k
views
Answer:
A: COnverting mouse gene ID to Human gene ID
4.4 years ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
3.0k
views
Answer:
A: Retrieve genomic physical coordinates of 3'UTR for set of genes
4.4 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
1.3k
views
Answer:
A: Splitting a big file according to the first colum value with bash
4.4 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
3.5k
views
Answer:
C: Where to get tbl2asn tool's current version?
4.4 years ago by
vkkodali_ncbi
★ 3.7k
7
votes
0
replies
1.3k
views
Answer:
A: Is there a tool to extract organism names from SRA accession IDs?
4.4 years ago by
vkkodali_ncbi
★ 3.7k
4
votes
0
replies
5.3k
views
Answer:
A: Intron and exon coordinates of all genes from Hg19
4.5 years ago by
vkkodali_ncbi
★ 3.7k
8
votes
2
replies
1.3k
views
Answer:
A: Obtain N50 stats from NCBI for all Hymenoptera genome assemblies
4.5 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
1.2k
views
Answer:
A: Entrez Direct: epost removes duplicates
4.5 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
1.8k
views
Answer:
C: XML from entrez not formatted correctly
4.5 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
749
views
Answer:
A: NCBI rRNA sequence search
4.6 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
6.9k
views
Answer:
A: How to get the chromosome numbers from RefSeq accession IDs?
4.6 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
8.2k
views
Answer:
A: How to obtain the chromosome out of an accession number?
4.6 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
3.4k
views
Answer:
A: select longest isoform from RefSeq proteome fasta
4.6 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
3.5k
views
Answer:
A: Retrieve FASTA sequences for all genes from GRCh38.p13
4.6 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
1.4k
views
Answer:
A: Is there a "default" RefSeq transcript for genes?
4.6 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
3.2k
views
Answer:
A: get gene biotype for hg38 refseq
4.6 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
1.2k
views
Answer:
A: Get genomes in genbank that are NOT in RefSeq
4.6 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.6k
views
Answer:
A: NCBI gene Dabase info extration
4.6 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
2.6k
views
Answer:
A: map refseq to identical genbank
4.6 years ago by
vkkodali_ncbi
★ 3.7k
3
votes
0
replies
874
views
Answer:
A: LOC Record Withdrawn from NCBI
4.6 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
3.4k
views
Answer:
A: more elegant way to download genomes via edirect/eutils
4.7 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
1.6k
views
Answer:
A: Extracting blocks features by their coordinates in a genome (using BioPython)?
4.9 years ago by
vkkodali_ncbi
★ 3.7k
3
votes
0
replies
1.3k
views
Answer:
A: Download All The Bacterial Genomes of Pseudomonas aeruginosa From Ncbi
5.0 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
2.2k
views
Answer:
A: Multiple protein accession number query Command LIne Blastp
5.0 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
2.8k
views
Answer:
A: Downloading set of fasta sequences based on gene id
5.0 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.8k
views
Answer:
A: retrieving only one result using entrez direct
5.0 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
3.2k
views
Answer:
A: Convert RefseqID to EntrezID
5.0 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
1.4k
views
Answer:
A: Annotate CpG Islands for a new genome
5.1 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
2.6k
views
Answer:
A: Can Ncbi Blast Only Search A Special Region In Database For Hits?
5.2 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
817
views
Answer:
A: Extracting the assemblies from wgs accessions
5.3 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
1.6k
views
Answer:
A: Number of discovered genes in genome does not correspond with published annotati
5.3 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
2
replies
1.6k
views
Answer:
A: Number of genomes sequences in NCBI
5.3 years ago by
vkkodali_ncbi
★ 3.7k
3
votes
2
replies
2.2k
views
Answer:
A: Downloading individual reads from SRA
5.3 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
2.6k
views
Answer:
A: GenBank features don't extract sequences based on condition Biopython
5.4 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
2.3k
views
Answer:
A: How to download the feature table file of whole genome
5.4 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
2.4k
views
Answer:
A: Programmatic access to Sample Information from GEO via GSM or SRR number
5.4 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
1.7k
views
Answer:
A: How can I parse a json file from MobiDB to retrieve proteome data?
5.4 years ago by
vkkodali_ncbi
★ 3.7k
4
votes
1
reply
1.4k
views
Answer:
A: Batch Retrieval of Conserved Domains from a List of IDs?
5.4 years ago by
vkkodali_ncbi
★ 3.7k
3
votes
2
replies
1.8k
views
Answer:
A: How to download the .dat file of the UniProt Metazoa?
5.4 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
1.1k
views
Answer:
A: Retrieving domain loci
5.4 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
1.7k
views
Answer:
A: Get just GenBank record while downloading genome with Biopython
5.4 years ago by
vkkodali_ncbi
★ 3.7k
4
votes
3
replies
4.9k
views
Answer:
A: How to retrieve sets of protein sequences?
5.4 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
4.3k
views
Answer:
A: Filter the non-redundant NCBI database based on taxonomy
5.4 years ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
2.2k
views
Answer:
A: UniProtKB - mapping gene name to ID (*_HUMAN ) using python2
5.4 years ago by
vkkodali_ncbi
★ 3.7k
4
votes
1
reply
2.7k
views
Answer:
A: Which tool can remove SignalP predicted signal peptides from FASTA file?
5.4 years ago by
vkkodali_ncbi
★ 3.7k
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