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Comment:
Comment: Elusive syntax error in Snakefile
7 months ago by
vkkodali_ncbi
★ 3.7k
0
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0
replies
975
views
Comment:
Comment: NCBI Gene Table Bulk Download
7 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
975
views
Comment:
Comment: NCBI Gene Table Bulk Download
7 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
628
views
Answer:
Answer: RefseqID to gene symbol for multiple species
7 months ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.9k
views
Comment:
Comment: What does a gene's "aligned length" represent?
7 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
2
replies
1.9k
views
Answer:
Answer: What does a gene's "aligned length" represent?
7 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
762
views
Answer:
Answer: SRA and Bioproject IDs
7 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
885
views
Answer:
Answer: How are duplicated genes named under GTF file?
8 months ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.9k
views
Answer:
Answer: How can I transfer gene models to a new assembly?
8 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
596
views
Answer:
Answer: Does STAR aligner use the maximum memory available?
8 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
798
views
Answer:
Answer: Any way to retrieve the annotation information of genomes under a bioproject ? (
12 months ago by
vkkodali_ncbi
★ 3.7k
0
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0
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1.5k
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Comment:
Comment: Reference genome
14 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
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738
views
Answer:
Answer: Unknown naming convention for genes
14 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
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579
views
Answer:
Answer: NCBI search with ENTREZ biopython last refseq version tag
14 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
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1.1k
views
Answer:
Answer: gff file from NCBI RefSeq GCF dataset has an invalid format
14 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
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637
views
Answer:
Answer: How do I download all genomes with specific ST type from ncbi
18 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
762
views
Answer:
Answer: Help with e-utils: Need one assembly accession from one protein accession
21 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
2.5k
views
Comment:
Comment: What is the command to download GTF from NCBI
22 months ago by
vkkodali_ncbi
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0
votes
1
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2.5k
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Comment:
Comment: What is the command to download GTF from NCBI
22 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
2.5k
views
Comment:
Comment: What is the command to download GTF from NCBI
22 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
2
replies
2.5k
views
Answer:
Answer: What is the command to download GTF from NCBI
22 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
608
views
Comment:
Comment: Retrieve nucleotide ID from protein ID
22 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
608
views
Answer:
Answer: Retrieve nucleotide ID from protein ID
22 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
967
views
Answer:
Answer: _1 in gene_ids of human T2T assemby gtf file
21 months ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.5k
views
Answer:
Answer: How to get sample details from NCBI datasets
22 months ago by
vkkodali_ncbi
★ 3.7k
4
votes
0
replies
1.3k
views
Answer:
Answer: How to download a large number of protein.faa.gz files from NCBI's FTP site in o
23 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
636
views
Answer:
Answer: Parse ncbiRefSeq (other like) annotations
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
1.2k
views
Answer:
Answer: Donwloading latest version of Mouse ref genome
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
753
views
Comment:
Comment: Conversion of gene symbol to refSeqID
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
753
views
Answer:
Answer: Conversion of gene symbol to refSeqID
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
950
views
Comment:
Comment: Genbank | large multi-isolate project
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
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950
views
Comment:
Comment: Genbank | large multi-isolate project
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
950
views
Answer:
Answer: Genbank | large multi-isolate project
23 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
944
views
Answer:
Answer: How can I get a taxid from an assembly id (e.g., GCA_003223415.1 -> 2026742)
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
480
views
Comment:
Comment: how to download NCBI partially non-redundant nucleotide dataset for prokaryotes?
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
664
views
Comment:
Comment: Retrieving specific subsequences from multiple references on NCBI?
23 months ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
797
views
Comment:
Comment: Genome Reference Consortium Human Build - Transcriptome Size Query
23 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
1.3k
views
Answer:
Answer: From GCA identifiers, download Genbank file format?
24 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
980
views
Comment:
Comment: How is the best way to filter a BED file to get specific exons from their gene I
24 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
1.2k
views
Comment:
Comment: New Human genome FASTA
2.1 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
1.1k
views
Comment:
Comment: Did NCBI deactivate many RefSeq accession numbers?
2.1 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
754
views
Answer:
Answer: Edirect query help: How to determine which querys can be linked to a different d
2.1 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
1.4k
views
Answer:
Answer: NCBI Reference Fasta Tar Issues
2.1 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
1.4k
views
Comment:
Comment: convert genome coordinates from b36 to hg19
2.2 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
1.4k
views
Answer:
Answer: convert genome coordinates from b36 to hg19
2.2 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
642
views
Answer:
Answer: The meaning of greter than character (>) in gene position in Genbank files
2.2 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
2.2k
views
Answer:
Answer: Retrieving gene ID using transcripts ID from Entrez database using CLI or Batc
2.2 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
2
replies
1.5k
views
Answer:
Answer: Reference genome
2.2 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
977
views
Answer:
Answer: How to use efetch to download specific gene from whole genome NCBI by linux term
2.2 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
1.7k
views
Comment:
Comment: NCBI E-eutilitis not working properly inside a while loop
2.2 years ago by
vkkodali_ncbi
★ 3.7k
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