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6
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13
replies
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Getting sample information from GEO
GEO NCBI
updated 6 months ago by ★ 4.4k • written 8.4 years ago by ▴ 360
1
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0
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4.0k
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Comment: C: RNA-seq data from human tumors in mice (PDTX)
6.9 years ago by Tom_L ▴ 360
7
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5
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4.0k
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RNA-seq data from human tumors in mice (PDTX)
RNA-Seq mouse human
updated 7.0 years ago by ▴ 30 • written 7.0 years ago by ▴ 360
0
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0
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4.0k
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Comment: C: RNA-seq data from human tumors in mice (PDTX)
7.0 years ago by Tom_L ▴ 360
3
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2
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3.7k
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Comment: C: How to align mouse transcriptome data using bowtie2?
7.7 years ago by Tom_L ▴ 360
0
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1
reply
5.0k
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Comment: C: Trinity: how to avoid out of memory error in butterfly
8.1 years ago by Tom_L ▴ 360
2
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0
replies
11k
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Answer: C: Human transcription download
8.1 years ago by Tom_L ▴ 360
1
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0
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6.7k
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Comment: C: How to statistically compare two unit vectors?
8.1 years ago by Tom_L ▴ 360
0
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1
reply
4.8k
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Comment: C: Removal of PCR dupliactes from trimmed reads
8.1 years ago by Tom_L ▴ 360
0
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0
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5.3k
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Comment: C: Enrichment analysis: Which tool I should trust?
8.1 years ago by Tom_L ▴ 360
1
vote
1
reply
7.2k
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Answer: A: Bam to fastq conversion is giving error?
8.3 years ago by Tom_L ▴ 360
0
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0
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14k
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Answer: A: determining cutoff for Kaplan Meier
8.3 years ago by Tom_L ▴ 360
0
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0
replies
2.4k
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GSEA signal strength
GSEA
8.3 years ago by Tom_L ▴ 360
0
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1
reply
10k
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Comment: C: Getting sample information from GEO
8.4 years ago by Tom_L ▴ 360
5
votes
1
reply
10k
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Answer: A: Getting sample information from GEO
8.4 years ago by Tom_L ▴ 360
1
vote
0
replies
2.3k
views
Answer: A: How to choose a reference genome when there's no genome information in database
8.5 years ago by Tom_L ▴ 360
1
vote
1
reply
3.6k
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Comment: C: Merging of datasets from same tissue/region
8.5 years ago by Tom_L ▴ 360
0
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1
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3.6k
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Comment: C: Merging of datasets from same tissue/region
8.5 years ago by Tom_L ▴ 360
0
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0
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4.5k
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Comment: C: Strand specific pair end Illumina sequencing
8.5 years ago by Tom_L ▴ 360
1
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1
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4.5k
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Answer: A: Strand specific pair end Illumina sequencing
8.5 years ago by Tom_L ▴ 360
0
votes
0
replies
3.2k
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Comment: C: Bowtie fails to align reads that appear in the reference sequence
8.5 years ago by Tom_L ▴ 360
0
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0
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2.7k
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Comment: C: how to extract all the gene in chromosome X in bed file using R package (rtackla
8.6 years ago by Tom_L ▴ 360
3
votes
1
reply
4.6k
views
Survival analyses: how to compare multiple groups?
R survival statistics
8.6 years ago by Tom_L ▴ 360
5
votes
2
replies
17k
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Answer: A: How to filter/view reads mapped to multiple locations using samtools or pysam
8.6 years ago by Tom_L ▴ 360
0
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0
replies
2.4k
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Answer: A: How to calculate the sum of ranks per gene??
8.6 years ago by Tom_L ▴ 360
1
vote
1
reply
3.3k
views
Comment: C: How to differentiate SNPs Vs Sequencing error in RNA Seq?
8.6 years ago by Tom_L ▴ 360
2
votes
1
reply
9.3k
views
Answer: A: What is first publication/mention of term RNA-seq
8.6 years ago by Tom_L ▴ 360
1
vote
1
reply
1.7k
views
Answer: A: NGS - Mapping quality of specific regions
8.6 years ago by Tom_L ▴ 360
0
votes
1
reply
1.5k
views
Answer: A: How many paired FASTQ reads to input for alignment if 4 different SRA IDs belong
8.7 years ago by Tom_L ▴ 360
0
votes
1
reply
2.5k
views
Answer: A: why allelic count on forward and reverse strand do not add up to depth in the re
8.7 years ago by Tom_L ▴ 360
2
votes
0
replies
7.6k
views
Comment: C: How to perform Fisher's exact test between two gene lists for a particular gene
8.7 years ago by Tom_L ▴ 360
0
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1
reply
7.6k
views
Comment: C: How to perform Fisher's exact test between two gene lists for a particular gene
8.7 years ago by Tom_L ▴ 360
0
votes
0
replies
1.6k
views
Answer: A: validating SNPs from NGS Analysis for multiple samples
8.7 years ago by Tom_L ▴ 360
1
vote
1
reply
1.8k
views
Effects of cohort size on survival estimation
R
8.7 years ago by Tom_L ▴ 360
5
votes
2
replies
6.2k
views
Answer: A: How can I integrate gene with PPI network
8.9 years ago by Tom_L ▴ 360
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