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0
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1
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3.8k
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Comment: C: Bedtools intersect alternatives available
5.5 years ago by John Marshall 3.0k
0
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1
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4.3k
views
Answer: A: Install vcf2bed plugin for bcftools
5.6 years ago by John Marshall 3.0k
0
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0
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4.3k
views
Comment: C: Install vcf2bed plugin for bcftools
5.6 years ago by John Marshall 3.0k
1
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1
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4.0k
views
Comment: C: Probable bug in bcftools while parsing headers
5.6 years ago by John Marshall 3.0k
0
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0
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4.0k
views
Comment: C: Probable bug in bcftools while parsing headers
5.6 years ago by John Marshall 3.0k
3
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0
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1.4k
views
Answer: A: GNU autotools and samtools/htslib
5.6 years ago by John Marshall 3.0k
1
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1
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4.1k
views
Comment: C: how to use samtools sort correctly?
5.8 years ago by John Marshall 3.0k
2
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0
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4.1k
views
Answer: A: how to use samtools sort correctly?
5.8 years ago by John Marshall 3.0k
1
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0
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1.7k
views
Comment: C: BWA MEM Supplementary Tag Position (0 or 1 based)
5.9 years ago by John Marshall 3.0k
0
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1
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2.8k
views
Comment: C: sequence and quality are inconsistent
6.2 years ago by John Marshall 3.0k
1
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1
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2.8k
views
Comment: C: sequence and quality are inconsistent
6.2 years ago by John Marshall 3.0k
0
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0
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1.9k
views
Comment: C: samtools pileup format: insertions and deletions' quality
6.2 years ago by John Marshall 3.0k
1
vote
0
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1.9k
views
Answer: A: samtools pileup format: insertions and deletions' quality
6.2 years ago by John Marshall 3.0k
3
votes
0
replies
2.9k
views
Answer: A: SAMTOOLS SORT eeor
6.3 years ago by John Marshall 3.0k
3
votes
1
reply
2.2k
views
Answer: A: Samtools mpileup output: missing fields?
6.7 years ago by John Marshall 3.0k
0
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1
reply
2.0k
views
Answer: A: BAM Index Chunks
6.7 years ago by John Marshall 3.0k
2
votes
0
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1.9k
views
Answer: A: faidx implementation with C++
6.7 years ago by John Marshall 3.0k
2
votes
0
replies
1.7k
views
Comment: C: what should a SAM/BAM record contain when there are no quality scores
6.7 years ago by John Marshall 3.0k
1
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0
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1.7k
views
Comment: C: what should a SAM/BAM record contain when there are no quality scores
6.7 years ago by John Marshall 3.0k
2
votes
1
reply
2.9k
views
Answer: A: PandaSeq install error: ltld required, install libtool library
6.8 years ago by John Marshall 3.0k
2
votes
1
reply
2.5k
views
Comment: C: When is the SM tag different for different reads of the same sample?
6.9 years ago by John Marshall 3.0k
0
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0
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2.0k
views
Comment: C: samtools/tabix with https support?
7.0 years ago by John Marshall 3.0k
1
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1
reply
2.0k
views
Answer: A: samtools/tabix with https support?
7.0 years ago by John Marshall 3.0k
0
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0
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1.9k
views
Comment: C: Problem Converting BAM to SAM on to Amazon-S3 Using Samtools
7.2 years ago by John Marshall 3.0k
2
votes
2
replies
8.2k
views
Answer: A: samtools addreplacerg gives error
7.3 years ago by John Marshall 3.0k
0
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0
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2.7k
views
Comment: C: Samtools mpileup reference is different from input reference fasta
7.4 years ago by John Marshall 3.0k
3
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1
reply
2.4k
views
Answer: A: Need help interpreting gdb backtrace from a SAMtools segmentation default (or he
7.4 years ago by John Marshall 3.0k
3
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0
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2.5k
views
Comment: C: SAM file: same reads ID, slightly different sequence
7.4 years ago by John Marshall 3.0k
3
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0
replies
3.0k
views
Answer: A: Samtools sort error
7.4 years ago by John Marshall 3.0k
2
votes
0
replies
4.9k
views
Answer: A: failed to convert from cram to bam
7.5 years ago by John Marshall 3.0k
1
vote
0
replies
1.8k
views
Answer: A: Pileup format parsing difficulty
7.6 years ago by John Marshall 3.0k
0
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0
replies
13k
views
Comment: C: Can't get samtools version: "unrecognized command"
7.6 years ago by John Marshall 3.0k
0
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0
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4.1k
views
Comment: C: Cannot build cufflinks 2.2.1 from source (possible problem with samtools 1.3.1)
7.6 years ago by John Marshall 3.0k
2
votes
0
replies
2.8k
views
Answer: A: In new genome, how is it decided which strand is forward/reverse?
7.7 years ago by John Marshall 3.0k
0
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0
replies
3.2k
views
Comment: C: Installing Stacks on a cluster problem with Make install
7.7 years ago by John Marshall 3.0k
1
vote
1
reply
3.2k
views
Comment: C: Installing Stacks on a cluster problem with Make install
7.7 years ago by John Marshall 3.0k
2
votes
1
reply
3.2k
views
Answer: A: Installing Stacks on a cluster problem with Make install
7.7 years ago by John Marshall 3.0k
1
vote
0
replies
6.6k
views
Answer: A: samtools creating difficulties in installtion
7.7 years ago by John Marshall 3.0k
0
votes
0
replies
5.0k
views
Answer: A: ANGSD hwrite error (wrong size)
8.0 years ago by John Marshall 3.0k
1
vote
0
replies
4.4k
views
Comment: C: Using samtools and Picard tools with cram files
8.1 years ago by John Marshall 3.0k
0
votes
0
replies
4.0k
views
Comment: C: samtools mpileup memory leakage
8.1 years ago by John Marshall 3.0k
1
vote
0
replies
11k
views
Comment: C: Tool for random access to indexed BAM files in S3?
8.2 years ago by John Marshall 3.0k
1
vote
0
replies
11k
views
Comment: C: Tool for random access to indexed BAM files in S3?
8.2 years ago by John Marshall 3.0k
1
vote
0
replies
11k
views
Comment: Comment: Tool for random access to indexed BAM files in S3?
updated 21 months ago by 43k • written 8.4 years ago by 3.0k
3
votes
0
replies
6.8k
views
Answer: Answer: Best VCF file validator
updated 19 months ago by 43k • written 8.6 years ago by 3.0k
0
votes
2
replies
2.1k
views
Answer: Answer: Error in velvet
updated 18 months ago by 43k • written 8.7 years ago by 3.0k
9
votes
2
replies
11k
views
Answer: Answer: Tool for random access to indexed BAM files in S3?
updated 16 months ago by 43k • written 8.9 years ago by 3.0k
1
vote
0
replies
5.5k
views
Comment: Comment: samtools mpileup Aborted (Core dumped)
updated 24 months ago by 43k • written 9.2 years ago by 3.0k
2
votes
1
reply
5.5k
views
Comment: Comment: samtools mpileup Aborted (Core dumped)
updated 24 months ago by 43k • written 9.2 years ago by 3.0k
3
votes
0
replies
2.3k
views
Answer: Answer: sam header is not recognized by awk?
updated 2.2 years ago by 43k • written 9.4 years ago by 3.0k
166 results • Page 3 of 4
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