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Help scaffolding an Illumina genome assembly with 10x reads
Assembly genome next-gen
updated 4.6 years ago by ▴ 20 • written 5.7 years ago by ▴ 130
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Answer: A: RNAseq service recommendations
5.5 years ago by maxwhjohn1988 ▴ 130
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Answer: A: unexpected bowtie2 unpaired alignment behavior
5.5 years ago by maxwhjohn1988 ▴ 130
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Answer: C: How to perform fst test using SNPs frequency?
5.6 years ago by maxwhjohn1988 ▴ 130
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Comment: C: How to perform fst test using SNPs frequency?
5.6 years ago by maxwhjohn1988 ▴ 130
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1.2k
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Comment: C: How to perform fst test using SNPs frequency?
5.6 years ago by maxwhjohn1988 ▴ 130
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2.7k
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Comment: C: Help scaffolding an Illumina genome assembly with 10x reads
5.7 years ago by maxwhjohn1988 ▴ 130
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3.4k
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Comment: C: Enhancing draft genome using 10X data
5.7 years ago by maxwhjohn1988 ▴ 130
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3.4k
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Comment: C: Enhancing draft genome using 10X data
5.7 years ago by maxwhjohn1988 ▴ 130
0
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3.4k
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Comment: C: Enhancing draft genome using 10X data
5.7 years ago by maxwhjohn1988 ▴ 130
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1
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3.4k
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Comment: C: Enhancing draft genome using 10X data
5.7 years ago by maxwhjohn1988 ▴ 130
0
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1
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3.4k
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Comment: C: Enhancing draft genome using 10X data
5.7 years ago by maxwhjohn1988 ▴ 130
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2
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3.4k
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Comment: C: Enhancing draft genome using 10X data
5.7 years ago by maxwhjohn1988 ▴ 130
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3.9k
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Answer: A: Glimmer 3 multi-extract input problem
6.0 years ago by maxwhjohn1988 ▴ 130
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2.3k
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Comment: C: merging 10X genomics assemblies
6.1 years ago by maxwhjohn1988 ▴ 130
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3.4k
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Comment: C: Enhancing draft genome using 10X data
6.1 years ago by maxwhjohn1988 ▴ 130
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1.2k
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Comment: C: Are there any de novo assemblers which can handle (either) transcriptomic or gen
6.3 years ago by maxwhjohn1988 ▴ 130
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1.2k
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Comment: C: Are there any de novo assemblers which can handle (either) transcriptomic or gen
6.3 years ago by maxwhjohn1988 ▴ 130
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3
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1.2k
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Are there any de novo assemblers which can handle (either) transcriptomic or genomic reads?
Assembly DNA RNA
updated 6.3 years ago by 16k • written 6.3 years ago by ▴ 130
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8.4k
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Comment: C: Edgeredef Failed When Running Repeatmodeler
6.3 years ago by maxwhjohn1988 ▴ 130
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3.4k
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Answer: A: Repeatmodeler Error (Eleredef)
6.7 years ago by maxwhjohn1988 ▴ 130
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8.4k
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Comment: Comment: Edgeredef Failed When Running Repeatmodeler
6.8 years ago by maxwhjohn1988 ▴ 130
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5.1k
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Comment: C: GAWN - Genome Annotation Without Nightmares
7.1 years ago by maxwhjohn1988 ▴ 130
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4.5k
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Comment: C: Running MAKER2 pipeline with Augustus for the first time -- need some guidance
7.1 years ago by maxwhjohn1988 ▴ 130
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1.9k
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Comment: C: Eukaryotic Genome Annotation - Without ESTs or Transcriptomic or Proteomic Data
7.1 years ago by maxwhjohn1988 ▴ 130
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2
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1.9k
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Eukaryotic Genome Annotation - Without ESTs or Transcriptomic or Proteomic Data
Annotation Gene prediction Non-model organisms
7.1 years ago by maxwhjohn1988 ▴ 130
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1.8k
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Comment: C: Help me choose an assembler (for something quite specific)
7.1 years ago by maxwhjohn1988 ▴ 130
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Comment: C: Help me choose an assembler (for something quite specific)
7.1 years ago by maxwhjohn1988 ▴ 130
2
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5
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1.8k
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Help me choose an assembler (for something quite specific)
Assembly next-gen genome
updated 7.1 years ago by 7.0k • written 7.2 years ago by ▴ 130
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1.6k
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Answer: A: Merging two split contigs
7.2 years ago by maxwhjohn1988 ▴ 130
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3.6k
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Answer: A: Doubt about specifying options in SPAdes
7.2 years ago by maxwhjohn1988 ▴ 130
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2.8k
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Comment: C: DiscovarDenovo - fastq files should be interlaced
7.2 years ago by maxwhjohn1988 ▴ 130
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2.8k
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Answer: A: DiscovarDenovo - fastq files should be interlaced
7.2 years ago by maxwhjohn1988 ▴ 130
2
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1
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3.1k
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Answer: A: Discovar De Novo assembly - "Attempt to allocate memory failed"
7.2 years ago by maxwhjohn1988 ▴ 130
5
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11
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3.1k
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Discovar De Novo assembly - "Attempt to allocate memory failed"
Assembly next-gen software error genome
7.2 years ago by maxwhjohn1988 ▴ 130
0
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0
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3.1k
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Comment: C: Can I use BLASTn to only return hits which start with a perfect match to a parti
7.3 years ago by maxwhjohn1988 ▴ 130
0
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1
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3.1k
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Comment: C: Can I use BLASTn to only return hits which start with a perfect match to a parti
7.3 years ago by maxwhjohn1988 ▴ 130
0
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1
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3.1k
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Comment: C: Can I use BLASTn to only return hits which start with a perfect match to a parti
7.3 years ago by maxwhjohn1988 ▴ 130
0
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2
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3.1k
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Comment: C: Can I use BLASTn to only return hits which start with a perfect match to a parti
7.3 years ago by maxwhjohn1988 ▴ 130
0
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0
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3.1k
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Comment: C: Can I use BLASTn to only return hits which start with a perfect match to a parti
7.3 years ago by maxwhjohn1988 ▴ 130
2
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10
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3.1k
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Can I use BLASTn to only return hits which start with a perfect match to a particular string?
BLAST RADseq Cut site SequenceServer
7.3 years ago by maxwhjohn1988 ▴ 130
0
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0
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3.1k
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Comment: C: Discovar De Novo assembly - "Attempt to allocate memory failed"
7.3 years ago by maxwhjohn1988 ▴ 130
0
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1
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3.1k
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Comment: C: Discovar De Novo assembly - "Attempt to allocate memory failed"
7.3 years ago by maxwhjohn1988 ▴ 130
0
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2
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3.1k
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Comment: C: Discovar De Novo assembly - "Attempt to allocate memory failed"
7.3 years ago by maxwhjohn1988 ▴ 130
0
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1
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3.1k
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Comment: C: Discovar De Novo assembly - "Attempt to allocate memory failed"
7.3 years ago by maxwhjohn1988 ▴ 130
0
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1
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3.1k
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Comment: C: Discovar De Novo assembly - "Attempt to allocate memory failed"
7.3 years ago by maxwhjohn1988 ▴ 130
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