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Comment: C: Visualize Gene Fusions
8.6 years ago by Amitm ★ 2.3k
1
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2.7k
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Answer: A: Annotation of repeatative elements
8.6 years ago by Amitm ★ 2.3k
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2.1k
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Comment: C: Un pack cel files
8.6 years ago by Amitm ★ 2.3k
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0
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3.1k
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Answer: C: Predict if the mutation is activating or deactivating
8.6 years ago by Amitm ★ 2.3k
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1
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8.6k
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Comment: C: RNA-seq RPKM significance cut off
8.6 years ago by Amitm ★ 2.3k
2
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1
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8.6k
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Answer: A: RNA-seq RPKM significance cut off
8.6 years ago by Amitm ★ 2.3k
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1
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1.6k
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Comment: C: RNAseq assembly for diploid genome.
8.6 years ago by Amitm ★ 2.3k
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1
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3.0k
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Comment: C: Biology side of bioinformatics
8.6 years ago by Amitm ★ 2.3k
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1.4k
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Answer: A: bar code manipulation
8.6 years ago by Amitm ★ 2.3k
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1.1k
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Answer: A: What is the gene corresponding to MIR382 RNA molecule?
8.7 years ago by Amitm ★ 2.3k
2
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1
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2.5k
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Comment: C: Cancer RNA-seq data
8.7 years ago by Amitm ★ 2.3k
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5.9k
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Comment: C: How can I detect lncRNA?
8.7 years ago by Amitm ★ 2.3k
1
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0
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6.6k
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Comment: C: dbsnp in vcf format compatible with hg38
8.7 years ago by Amitm ★ 2.3k
2
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1
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6.6k
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Comment: C: Which source of annotation files to use, Ensemble or UCSC?
8.7 years ago by Amitm ★ 2.3k
1
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2
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5.9k
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Comment: C: How can I detect lncRNA?
8.7 years ago by Amitm ★ 2.3k
1
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2
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5.9k
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Comment: C: How can I detect lncRNA?
8.7 years ago by Amitm ★ 2.3k
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1
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5.9k
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Comment: C: How can I detect lncRNA?
8.7 years ago by Amitm ★ 2.3k
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1
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5.9k
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Comment: C: How can I detect lncRNA?
8.7 years ago by Amitm ★ 2.3k
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0
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2.9k
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Comment: C: MuTect --- with more stringent parameter settings I got more mutations -- Is thi
8.7 years ago by Amitm ★ 2.3k
4
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2
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9.6k
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Comment: C: From TCGA to GDC (Genomic data commons)
8.8 years ago by Amitm ★ 2.3k
1
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1
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2.1k
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Comment: C: TCGA exons data-de novo isoform assembly
8.8 years ago by Amitm ★ 2.3k
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0
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3.8k
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Comment: C: Clear explanation of parameter minReads2 in VarScan
8.8 years ago by Amitm ★ 2.3k
1
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1
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3.8k
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Comment: C: Clear explanation of parameter minReads2 in VarScan
8.8 years ago by Amitm ★ 2.3k
1
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1
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3.8k
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Comment: C: Clear explanation of parameter minReads2 in VarScan
8.8 years ago by Amitm ★ 2.3k
0
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1
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3.8k
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Comment: C: Clear explanation of parameter minReads2 in VarScan
8.8 years ago by Amitm ★ 2.3k
1
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1
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2.1k
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Comment: C: TCGA exons data-de novo isoform assembly
8.8 years ago by Amitm ★ 2.3k
1
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1
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2.1k
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Comment: C: getting reads counts at RefSeq genes
8.8 years ago by Amitm ★ 2.3k
1
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1
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2.1k
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Answer: A: getting reads counts at RefSeq genes
8.8 years ago by Amitm ★ 2.3k
1
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1
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2.1k
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Comment: C: removing dbsnp for indel vcf
8.8 years ago by Amitm ★ 2.3k
0
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0
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3.9k
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Comment: C: Does CDS, start_codon and stop_codon in gtf affect transcriptome assembly by Str
8.9 years ago by Amitm ★ 2.3k
0
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1
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3.9k
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Comment: C: Does CDS, start_codon and stop_codon in gtf affect transcriptome assembly by Str
8.9 years ago by Amitm ★ 2.3k
4
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2
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3.9k
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Answer: A: Does CDS, start_codon and stop_codon in gtf affect transcriptome assembly by Str
8.9 years ago by Amitm ★ 2.3k
0
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0
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2.5k
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Comment: C: Few genes with many reads aligned,
8.9 years ago by Amitm ★ 2.3k
1
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0
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2.5k
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Comment: C: Few genes with many reads aligned,
8.9 years ago by Amitm ★ 2.3k
1
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0
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7.7k
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Comment: C: Picard Markduplicates output
8.9 years ago by Amitm ★ 2.3k
2
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1
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7.7k
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Answer: A: Picard Markduplicates output
8.9 years ago by Amitm ★ 2.3k
0
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1
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3.8k
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Comment: C: Non-cancer somatic mutation calling
8.9 years ago by Amitm ★ 2.3k
0
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1
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4.0k
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Comment: C: ADTEx coverage issue
8.9 years ago by Amitm ★ 2.3k
0
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1
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4.0k
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Comment: C: ADTEx coverage issue
8.9 years ago by Amitm ★ 2.3k
0
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0
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2.9k
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Comment: C: non human contaminants in sequencing
8.9 years ago by Amitm ★ 2.3k
0
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1
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4.0k
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Comment: C: ADTEx coverage issue
8.9 years ago by Amitm ★ 2.3k
0
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1
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4.0k
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Answer: A: ADTEx coverage issue
8.9 years ago by Amitm ★ 2.3k
4
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1
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3.8k
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Answer: A: Non-cancer somatic mutation calling
8.9 years ago by Amitm ★ 2.3k
0
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1
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3.2k
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Comment: C: High percentage of UTR mutations in RNAseq
9.0 years ago by Amitm ★ 2.3k
0
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1
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3.6k
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Comment: C: BLAT: how to select best hit at one genomic position? (queries are repeats)
9.0 years ago by Amitm ★ 2.3k
0
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1
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3.6k
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Answer: A: BLAT: how to select best hit at one genomic position? (queries are repeats)
9.0 years ago by Amitm ★ 2.3k
1
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1
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7.8k
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Comment: C: New to BEDtools, can't get intersect to work
9.0 years ago by Amitm ★ 2.3k
0
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1
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3.2k
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Comment: C: High percentage of UTR mutations in RNAseq
9.0 years ago by Amitm ★ 2.3k
0
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3
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3.2k
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Answer: A: High percentage of UTR mutations in RNAseq
9.0 years ago by Amitm ★ 2.3k
1
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0
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2.7k
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Comment: C: How to start Gene Analysis?
9.0 years ago by Amitm ★ 2.3k
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