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Comment: Comment: VCF indexing
7 weeks ago by Amitm ★ 2.2k
1
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1
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423
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Comment: Comment: Issue VEP installation MacOS
8 weeks ago by Amitm ★ 2.2k
0
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0
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564
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Comment: Comment: differences between trajectories in conditions with Monocle3 or other tools
8 weeks ago by Amitm ★ 2.2k
1
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1
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564
views
Comment: Comment: differences between trajectories in conditions with Monocle3 or other tools
9 weeks ago by Amitm ★ 2.2k
2
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1
reply
506
views
Comment: Comment: Integrated Seurat object change name of the two conditions
9 weeks ago by Amitm ★ 2.2k
0
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1
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506
views
Comment: Comment: Integrated Seurat object change name of the two conditions
9 weeks ago by Amitm ★ 2.2k
1
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1
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494
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Comment: Comment: Using STAR aligner to build index of hg38
9 weeks ago by Amitm ★ 2.2k
0
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0
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3.0k
views
Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
5 months ago by Amitm ★ 2.2k
0
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1
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943
views
Answer: Answer: IGV coverage bar has color, but no mutation?
10 months ago by Amitm ★ 2.2k
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0
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2.3k
views
Comment: Comment: R Columns to Seurat Object
10 months ago by Amitm ★ 2.2k
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1
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2.3k
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Comment: Comment: R Columns to Seurat Object
10 months ago by Amitm ★ 2.2k
1
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1
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1.0k
views
Answer: Answer: Need help understanding reference transcriptome and where to download
10 months ago by Amitm ★ 2.2k
0
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1
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2.3k
views
Comment: Comment: R Columns to Seurat Object
10 months ago by Amitm ★ 2.2k
1
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1
reply
2.3k
views
Answer: Answer: R Columns to Seurat Object
10 months ago by Amitm ★ 2.2k
1
vote
1
reply
441
views
Comment: Comment: Mutation callin For RNASeq
11 months ago by Amitm ★ 2.2k
0
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0
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1.7k
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Comment: Comment: Can't convert SRA to FASTQ with fasterq-dump. fasterq-dump was killed (signal 9
12 months ago by Amitm ★ 2.2k
2
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1
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1.1k
views
Answer: Answer: How to download the entire Run from Basespace illumina
12 months ago by Amitm ★ 2.2k
0
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0
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3.7k
views
Comment: Comment: how to interpret a CNV scatter plot
13 months ago by Amitm ★ 2.2k
0
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1
reply
6.0k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.9 years ago by Amitm ★ 2.2k
0
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1
reply
6.0k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.9 years ago by Amitm ★ 2.2k
0
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1
reply
6.0k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.9 years ago by Amitm ★ 2.2k
0
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1
reply
6.0k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.9 years ago by Amitm ★ 2.2k
1
vote
1
reply
1.3k
views
Comment: C: Error in GATK HaplotypeCaller
2.9 years ago by Amitm ★ 2.2k
0
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1
reply
1.3k
views
Comment: C: Error in GATK HaplotypeCaller
2.9 years ago by Amitm ★ 2.2k
0
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1
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6.0k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.9 years ago by Amitm ★ 2.2k
0
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2
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6.0k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.9 years ago by Amitm ★ 2.2k
3
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1
reply
746
views
Answer: C: Detecting CNVs from BAM file
2.9 years ago by Amitm ★ 2.2k
1
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1
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6.0k
views
Answer: A: STAR and StringTie to identify novel isoforms (please check my work)
2.9 years ago by Amitm ★ 2.2k
0
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0
replies
1.0k
views
Comment: C: How to create coverage graph/plot for an entire Illumina run
2.9 years ago by Amitm ★ 2.2k
1
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1
reply
1.4k
views
Comment: C: Platypus variant caller error
3.0 years ago by Amitm ★ 2.2k
1
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1
reply
1.4k
views
Comment: C: Platypus variant caller error
3.0 years ago by Amitm ★ 2.2k
0
votes
2
replies
1.4k
views
Comment: C: Platypus variant caller error
3.0 years ago by Amitm ★ 2.2k
0
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1
reply
1.1k
views
Comment: C: How to identify mRNA 3' UTR by bulk RNA-seq data
3.1 years ago by Amitm ★ 2.2k
0
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1
reply
1.2k
views
Comment: C: Platypus variant caller error
3.2 years ago by Amitm ★ 2.2k
1
vote
2
replies
3.7k
views
Comment: C: how to interpret a CNV scatter plot
3.2 years ago by Amitm ★ 2.2k
4
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1
reply
3.7k
views
Answer: C: how to interpret a CNV scatter plot
3.2 years ago by Amitm ★ 2.2k
0
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0
replies
1.7k
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Comment: C: Annotating VCF files
3.2 years ago by Amitm ★ 2.2k
0
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0
replies
1.0k
views
Comment: C: Creating bed file for gene specific variant extraction from VCF file
3.2 years ago by Amitm ★ 2.2k
1
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1
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1.8k
views
Comment: C: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2)
3.2 years ago by Amitm ★ 2.2k
0
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2
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1.0k
views
Answer: A: Creating bed file for gene specific variant extraction from VCF file
3.2 years ago by Amitm ★ 2.2k
0
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1
reply
1.3k
views
Comment: C: WES or WGS
3.2 years ago by Amitm ★ 2.2k
0
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1
reply
5.0k
views
Comment: C: how to get the installation histort of conda
3.2 years ago by Amitm ★ 2.2k
2
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1
reply
1.9k
views
Answer: A: TSS of canonical transcripts
3.2 years ago by Amitm ★ 2.2k
0
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1
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769
views
Comment: C: Getting huge size of CNV region from CNV-kit with hybrid data.
3.3 years ago by Amitm ★ 2.2k
0
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0
replies
2.2k
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Comment: C: Stringtie duplicate transcripts
3.6 years ago by Amitm ★ 2.2k
0
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0
replies
1.4k
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Comment: C: VCF to maf
3.7 years ago by Amitm ★ 2.2k
1
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1
reply
1.3k
views
Comment: C: Suggestion needed for finding fusion transcripts
3.8 years ago by Amitm ★ 2.2k
1
vote
0
replies
823
views
Answer: C: Classifying normal vs cancer tissues from mutational data
3.8 years ago by Amitm ★ 2.2k
4
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2
replies
1.3k
views
Answer: C: Suggestion needed for finding fusion transcripts
3.8 years ago by Amitm ★ 2.2k
2
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1
reply
1.1k
views
Answer: C: Interested in RNA-Seq splicing analysis - go for paired-end shorter or single-en
3.8 years ago by Amitm ★ 2.2k
279 results • Page 1 of 6
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