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Answer: A: Annotation of repeatative elements
7.2 years ago by Amitm ★ 2.2k
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1.9k
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Comment: C: Un pack cel files
7.2 years ago by Amitm ★ 2.2k
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2.6k
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Answer: C: Predict if the mutation is activating or deactivating
7.2 years ago by Amitm ★ 2.2k
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7.7k
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Comment: C: RNA-seq RPKM significance cut off
7.2 years ago by Amitm ★ 2.2k
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7.7k
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Answer: A: RNA-seq RPKM significance cut off
7.2 years ago by Amitm ★ 2.2k
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1.2k
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Comment: C: RNAseq assembly for diploid genome.
7.3 years ago by Amitm ★ 2.2k
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2.2k
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Comment: C: Biology side of bioinformatics
7.3 years ago by Amitm ★ 2.2k
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1.1k
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Answer: A: bar code manipulation
7.3 years ago by Amitm ★ 2.2k
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940
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Answer: A: What is the gene corresponding to MIR382 RNA molecule?
7.3 years ago by Amitm ★ 2.2k
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2.1k
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Comment: C: Cancer RNA-seq data
7.3 years ago by Amitm ★ 2.2k
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4.6k
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Comment: C: How can I detect lncRNA?
7.3 years ago by Amitm ★ 2.2k
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5.2k
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Comment: C: dbsnp in vcf format compatible with hg38
7.3 years ago by Amitm ★ 2.2k
2
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1
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5.9k
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Comment: C: Which source of annotation files to use, Ensemble or UCSC?
7.3 years ago by Amitm ★ 2.2k
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2
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4.6k
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Comment: C: How can I detect lncRNA?
7.3 years ago by Amitm ★ 2.2k
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4.6k
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Comment: C: How can I detect lncRNA?
7.3 years ago by Amitm ★ 2.2k
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4.6k
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Comment: C: How can I detect lncRNA?
7.3 years ago by Amitm ★ 2.2k
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4.6k
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Comment: C: How can I detect lncRNA?
7.3 years ago by Amitm ★ 2.2k
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2.5k
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Comment: C: MuTect --- with more stringent parameter settings I got more mutations -- Is thi
7.4 years ago by Amitm ★ 2.2k
4
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2
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8.2k
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Comment: C: From TCGA to GDC (Genomic data commons)
7.4 years ago by Amitm ★ 2.2k
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1.8k
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Comment: C: TCGA exons data-de novo isoform assembly
7.4 years ago by Amitm ★ 2.2k
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3.1k
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Comment: C: Clear explanation of parameter minReads2 in VarScan
7.4 years ago by Amitm ★ 2.2k
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3.1k
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Comment: C: Clear explanation of parameter minReads2 in VarScan
7.4 years ago by Amitm ★ 2.2k
1
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3.1k
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Comment: C: Clear explanation of parameter minReads2 in VarScan
7.4 years ago by Amitm ★ 2.2k
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3.1k
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Comment: C: Clear explanation of parameter minReads2 in VarScan
7.4 years ago by Amitm ★ 2.2k
1
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1
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1.8k
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Comment: C: TCGA exons data-de novo isoform assembly
7.4 years ago by Amitm ★ 2.2k
1
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1
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1.7k
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Comment: C: getting reads counts at RefSeq genes
7.4 years ago by Amitm ★ 2.2k
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1.7k
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Answer: A: getting reads counts at RefSeq genes
7.4 years ago by Amitm ★ 2.2k
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1.8k
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Comment: C: removing dbsnp for indel vcf
7.4 years ago by Amitm ★ 2.2k
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3.2k
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Comment: C: Does CDS, start_codon and stop_codon in gtf affect transcriptome assembly by Str
7.5 years ago by Amitm ★ 2.2k
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3.2k
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Comment: C: Does CDS, start_codon and stop_codon in gtf affect transcriptome assembly by Str
7.5 years ago by Amitm ★ 2.2k
4
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2
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3.2k
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Answer: A: Does CDS, start_codon and stop_codon in gtf affect transcriptome assembly by Str
7.5 years ago by Amitm ★ 2.2k
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2.1k
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Comment: C: Few genes with many reads aligned,
7.5 years ago by Amitm ★ 2.2k
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2.1k
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Comment: C: Few genes with many reads aligned,
7.5 years ago by Amitm ★ 2.2k
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6.7k
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Comment: C: Picard Markduplicates output
7.5 years ago by Amitm ★ 2.2k
2
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6.7k
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Answer: A: Picard Markduplicates output
7.5 years ago by Amitm ★ 2.2k
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1
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3.2k
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Comment: C: Non-cancer somatic mutation calling
7.5 years ago by Amitm ★ 2.2k
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1
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3.2k
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Comment: C: ADTEx coverage issue
7.5 years ago by Amitm ★ 2.2k
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1
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3.2k
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Comment: C: ADTEx coverage issue
7.5 years ago by Amitm ★ 2.2k
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2.5k
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Comment: C: non human contaminants in sequencing
7.5 years ago by Amitm ★ 2.2k
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3.2k
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Comment: C: ADTEx coverage issue
7.5 years ago by Amitm ★ 2.2k
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1
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3.2k
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Answer: A: ADTEx coverage issue
7.5 years ago by Amitm ★ 2.2k
4
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1
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3.2k
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Answer: A: Non-cancer somatic mutation calling
7.5 years ago by Amitm ★ 2.2k
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1
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2.5k
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Comment: C: High percentage of UTR mutations in RNAseq
7.6 years ago by Amitm ★ 2.2k
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1
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2.7k
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Comment: C: BLAT: how to select best hit at one genomic position? (queries are repeats)
7.6 years ago by Amitm ★ 2.2k
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1
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2.7k
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Answer: A: BLAT: how to select best hit at one genomic position? (queries are repeats)
7.6 years ago by Amitm ★ 2.2k
1
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6.1k
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Comment: C: New to BEDtools, can't get intersect to work
7.6 years ago by Amitm ★ 2.2k
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2.5k
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Comment: C: High percentage of UTR mutations in RNAseq
7.6 years ago by Amitm ★ 2.2k
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3
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2.5k
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Answer: A: High percentage of UTR mutations in RNAseq
7.6 years ago by Amitm ★ 2.2k
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2.2k
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Comment: C: How to start Gene Analysis?
7.6 years ago by Amitm ★ 2.2k
2
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1
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2.2k
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Answer: A: How to start Gene Analysis?
7.6 years ago by Amitm ★ 2.2k
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