User: Pappu
Pappu • 1.8k
- Reputation:
- 1,830
- Status:
- Trusted
- Location:
- Last seen:
- 4 hours ago
- Joined:
- 6 years, 10 months ago
- Email:
- p******@yahoo.com
Posts by Pappu
<prev
• 383 results •
page 1 of 39 •
next >
1
vote
0
answers
196
views
0
answers
... I want to filter out a list of protein sequences which have no homologs in bacteria. I am wondering if there is any easy way to do that. ...
1
vote
1
answer
209
views
1
answer
... I am looking for the human membrane protein gene symbols. I am wondering where can I download it. ...
0
votes
0
answers
286
views
0
answers
... I want to download gene expression data from ICGC. But most of the data seems to be from TCGA. ...
written 8 months ago by
Pappu • 1.8k
2
votes
2
answers
511
views
2
answers
... I am trying to make a data visualization web app in Python where users can visualize their gene expression mutation etc data sets and run basic analysis. I don't have experience in JavaScript. I am wondering if it would be possible to build such application or if their is any web framework tailored ...
0
votes
0
answers
329
views
0
answers
... I was trying to compare the log2 fold change in iTRAQ vs RNA-seq fpkm. Genes which have lfc>3 in RNA-seq, have lfc slightly higher than 1. I am wondering if it makes sense. ...
written 12 months ago by
Pappu • 1.8k
0
votes
1
answer
2.8k
views
1
answers
... 1 fpkm is a standard filter. ...
written 14 months ago by
Pappu • 1.8k
0
votes
2
answers
686
views
2
answers
... Check the ligand and receptor paper in nature communication from fantom consortium. ...
written 14 months ago by
Pappu • 1.8k
0
votes
0
answers
686
views
0
answers
... I was trying to run sleuth for differential expression analysis. But I don't have the kallisto bootstrap values. I am wondering if it can run without bootstrap estimates. ...
written 14 months ago by
Pappu • 1.8k
4
votes
1
answer
486
views
1
answer
... I am looking for books on NGS techniques and basic biology for bioinformatics students from computer science background. ...
written 14 months ago by
Pappu • 1.8k
• updated
14 months ago by
KVC_bioinfo • 350
1
vote
1
answer
578
views
1
answers
Comment:
C: FANTOM gene expression data
... Yes averaging gives weird result as many transcript expression is zero. I just took a sum of transcripts expression for each gene. ...
written 14 months ago by
Pappu • 1.8k
Latest awards to Pappu
Popular Question
9 days ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Popular Question
14 days ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Popular Question
12 weeks ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Popular Question
3 months ago,
created a question with more than 1,000 views.
For Assembled TCGA dataset download
Popular Question
3 months ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Popular Question
5 months ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Popular Question
5 months ago,
created a question with more than 1,000 views.
For Finding overlap between BAM files or BAM and gff3 files
Popular Question
5 months ago,
created a question with more than 1,000 views.
For Assembled TCGA dataset download
Popular Question
7 months ago,
created a question with more than 1,000 views.
For Assembled TCGA dataset download
Popular Question
7 months ago,
created a question with more than 1,000 views.
For Finding overlap between BAM files or BAM and gff3 files
Popular Question
7 months ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Appreciated
7 months ago,
created a post with more than 5 votes.
For ipython notebooks on bioinformatics and genomics
Popular Question
7 months ago,
created a question with more than 1,000 views.
For Difference between MrBayes and Beast MCC tree
Popular Question
7 months ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Great Question
7 months ago,
created a question with more than 5,000 views.
For Easiest way to convert python script to web application
Popular Question
7 months ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Popular Question
7 months ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Popular Question
8 months ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Great Question
10 months ago,
created a question with more than 5,000 views.
For What Is The Difference Between Nr And Trembl Database?
Popular Question
10 months ago,
created a question with more than 1,000 views.
For Estimating tumor purity from genomic data
Popular Question
10 months ago,
created a question with more than 1,000 views.
For Hot research areas in Bioinformatics for career development
Popular Question
10 months ago,
created a question with more than 1,000 views.
For Easiest way to convert python script to web application
Popular Question
10 months ago,
created a question with more than 1,000 views.
For Difference between MrBayes and Beast MCC tree
Popular Question
10 months ago,
created a question with more than 1,000 views.
For GUI framework for sequence data analysis and visulaization
Popular Question
10 months ago,
created a question with more than 1,000 views.
For Free/cheap cloud computing resource for processing NGS/Bioinformatic data
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 1184 users visited in the last hour