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4.4k
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Online Interactive Data Visualization
python
updated 7 months ago by ▴ 90 • written 10.1 years ago by ★ 2.1k
1
vote
1
reply
796
views
Comment: Comment: Query hg37 rsid information
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
521
views
Comment: Comment: conversion of fasta file format to tabular format
17 months ago by Pappu ★ 2.1k
0
votes
1
reply
4.8k
views
Comment: Comment: Csv. To VCF. File convert
17 months ago by Pappu ★ 2.1k
2
votes
0
replies
676
views
Comment: Comment: Retrieval of Active site information programmatically
17 months ago by Pappu ★ 2.1k
1
vote
1
reply
573
views
Comment: Comment: Can I select only one gene from protein isoforms when doing gene ontology from a
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
317
views
Comment: Comment: Differential expression between two conditions in sc RNA seq
17 months ago by Pappu ★ 2.1k
0
votes
1
reply
812
views
Comment: Comment: Ensembl IDs
17 months ago by Pappu ★ 2.1k
1
vote
0
replies
1.6k
views
Comment: Comment: Batch effect correction to compare differentially expressed genes across dataset
17 months ago by Pappu ★ 2.1k
1
vote
1
reply
482
views
Comment: Comment: whole-genome MSA of 1000 vertebrate sequences
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
458
views
Comment: Comment: QC of UKB BGEN format data
17 months ago by Pappu ★ 2.1k
0
votes
1
reply
4.8k
views
Comment: Comment: Csv. To VCF. File convert
17 months ago by Pappu ★ 2.1k
0
votes
1
reply
461
views
Comment: Comment: Clustering of samples based on gene expression
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
593
views
Comment: Comment: Fastq-dump warning: too many reads at spot id
17 months ago by Pappu ★ 2.1k
0
votes
1
reply
551
views
Comment: Comment: Heatmap rownames as gene names displayed as ensembl ID
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
749
views
Comment: Comment: Specific case of "bedtools intersect"
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
652
views
Comment: Comment: How to obtain gene length of yeast for tpm computation?
17 months ago by Pappu ★ 2.1k
1
vote
0
replies
316
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Comment: Comment: Parameterisation of Metallo-protein with amber
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
760
views
Comment: Comment: Get the coverage after read alignment with bwa-mem2
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
539
views
Comment: Comment: Multiple file genome alignment with STAR
17 months ago by Pappu ★ 2.1k
0
votes
1
reply
676
views
Comment: Comment: Retrieval of Active site information programmatically
17 months ago by Pappu ★ 2.1k
0
votes
1
reply
1.6k
views
Answer: Answer: Batch effect correction to compare differentially expressed genes across dataset
17 months ago by Pappu ★ 2.1k
0
votes
0
replies
1.0k
views
Answer: Answer: GROMACS error
18 months ago by Pappu ★ 2.1k
23
votes
11
replies
1.4k
views
11 follow
Useful productivity tools for bioinformaticians
RNA-Seq ChIP-Seq R next-gen Python
updated 20 months ago by ▴ 10 • written 3.8 years ago by ★ 2.1k
0
votes
1
reply
528
views
genomic region haplotype
SNP
updated 2.7 years ago by 23k • written 2.9 years ago by ★ 2.1k
1
vote
3
replies
2.1k
views
Looking For A Database Of All Proteins Expressed/Predicted In Completely Sequenced Genomes
genome
updated 2.7 years ago by 20 • written 10.6 years ago by ★ 2.1k
2
votes
4
replies
1.8k
views
Pooling replicates for CHIP-seq peak calling
ChIP-Seq
updated 2.7 years ago by 20 • written 2.9 years ago by ★ 2.1k
0
votes
1
reply
2.2k
views
RSEM expected_count vs normalized_count
RNA-Seq
updated 2.8 years ago by ▴ 330 • written 2.9 years ago by ★ 2.1k
2
votes
3
replies
1.6k
views
fastest galaxy host
galaxy
updated 13 months ago by 40k • written 7.9 years ago by ★ 2.1k
2
votes
2
replies
485
views
Peak length for TF motif discovery
ChIP-Seq
updated 2.9 years ago by ▴ 230 • written 2.9 years ago by ★ 2.1k
0
votes
0
replies
1.8k
views
Comment: C: Pooling replicates for CHIP-seq peak calling
2.9 years ago by Pappu ★ 2.1k
2
votes
2
replies
619
views
Genome region annotation
next-gen ChIP-Seq
2.9 years ago by Pappu ★ 2.1k
0
votes
1
reply
1.5k
views
Comment: C: ChIP-seq Motif Enrichment
2.9 years ago by Pappu ★ 2.1k
0
votes
1
reply
1.5k
views
Comment: C: ChIP-seq Motif Enrichment
2.9 years ago by Pappu ★ 2.1k
0
votes
2
replies
1.5k
views
Comment: C: ChIP-seq Motif Enrichment
2.9 years ago by Pappu ★ 2.1k
5
votes
8
replies
1.5k
views
ChIP-seq Motif Enrichment
ChIP-Seq
2.9 years ago by Pappu ★ 2.1k
2
votes
1
reply
513
views
How to do ChIP-seq QC
ChIP-Seq
updated 2.9 years ago by ★ 15k • written 2.9 years ago by ★ 2.1k
1
vote
0
replies
2.6k
views
Comment: C: Separating each cell in fastq file
2.9 years ago by Pappu ★ 2.1k
0
votes
1
reply
831
views
Comment: C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
2.9 years ago by Pappu ★ 2.1k
3
votes
8
replies
3.1k
views
ChIP-seq or Cut and Run Differential Binding Analysis
ChIP-Seq
updated 2.9 years ago by ★ 2.0k • written 2.9 years ago by ★ 2.1k
0
votes
0
replies
711
views
Comment: C: Organizing Scripts for Bioinformatics Analysis
2.9 years ago by Pappu ★ 2.1k
5
votes
4
replies
711
views
Organizing Scripts for Bioinformatics Analysis
RNA-Seq ChIP-Seq R python
updated 2.9 years ago by 77k • written 2.9 years ago by ★ 2.1k
0
votes
0
replies
3.1k
views
Comment: C: ChIP-seq or Cut and Run Differential Binding Analysis
2.9 years ago by Pappu ★ 2.1k
0
votes
1
reply
3.1k
views
Comment: C: ChIP-seq or Cut and Run Differential Binding Analysis
2.9 years ago by Pappu ★ 2.1k
2
votes
3
replies
1.7k
views
combining reads from multiple lanes for DE analysis
RNA-Seq
updated 3.6 years ago by 13k • written 4.7 years ago by ★ 2.1k
0
votes
1
reply
2.7k
views
Comment: C: GUI framework for sequence data analysis and visulaization
updated 3.8 years ago by 40k • written 7.7 years ago by ★ 2.1k
0
votes
1
reply
2.7k
views
Comment: C: GUI framework for sequence data analysis and visulaization
updated 3.8 years ago by 40k • written 7.8 years ago by ★ 2.1k
0
votes
1
reply
725
views
Comment: C: DE Analysis of Protein Coding Genes
4.0 years ago by Pappu ★ 2.1k
2
votes
3
replies
725
views
DE Analysis of Protein Coding Genes
RNA-Seq
4.0 years ago by Pappu ★ 2.1k
2
votes
2
replies
2.3k
views
Genomic Locus Diagram
python biopython
updated 4.5 years ago by 20 • written 9.6 years ago by ★ 2.1k
429 results • Page 1 of 9
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