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Comment: Comment: High Detection of Duplication in RNAseq dataset
8 hours ago by jared.andrews07 ★ 17k
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106
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Answer: Answer: Trying to understand basic DiffBind usage
15 hours ago by jared.andrews07 ★ 17k
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1.5k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
21 days ago by jared.andrews07 ★ 17k
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1.1k
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Comment: Comment: ROSE called super-enhancers overlapping with promoters
21 days ago by jared.andrews07 ★ 17k
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2
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1.1k
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Comment: Comment: DEseq2 on expected counts
26 days ago by jared.andrews07 ★ 17k
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1
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2.0k
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Comment: Comment: How get density plot TSS region for genes of interest
27 days ago by jared.andrews07 ★ 17k
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1
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1.1k
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Comment: Comment: DEseq2 on expected counts
28 days ago by jared.andrews07 ★ 17k
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414
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Comment: Comment: Pcoa plot
28 days ago by jared.andrews07 ★ 17k
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414
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Comment: Comment: Pcoa plot
29 days ago by jared.andrews07 ★ 17k
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221
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Answer: Answer: Creating a signature matrix using CibersortX
4 weeks ago by jared.andrews07 ★ 17k
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1.1k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
4 weeks ago by jared.andrews07 ★ 17k
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1.1k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
4 weeks ago by jared.andrews07 ★ 17k
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1
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1.1k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
4 weeks ago by jared.andrews07 ★ 17k
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343
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Comment: Comment: Approaches to validate hits from CRISPR-screen in mice
4 weeks ago by jared.andrews07 ★ 17k
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2
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1.1k
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Answer: Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
4 weeks ago by jared.andrews07 ★ 17k
0
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0
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1.1k
views
Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
4 weeks ago by jared.andrews07 ★ 17k
0
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1
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343
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Answer: Answer: Approaches to validate hits from CRISPR-screen in mice
4 weeks ago by jared.andrews07 ★ 17k
1
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0
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13k
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Comment: Comment: Combining GSEA (Gene Set Enrichment analysis) and DEG (Differentially Expressed
5 weeks ago by jared.andrews07 ★ 17k
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304
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Answer: Answer: Is ComBat not able to to handle only two batches? What are good alternatives?
6 weeks ago by jared.andrews07 ★ 17k
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1
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488
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Comment: Comment: DESeq2 results vs. shrinkage results
7 weeks ago by jared.andrews07 ★ 17k
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1
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617
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Comment: Comment: Grammar of Graphics for Heatmap
7 weeks ago by jared.andrews07 ★ 17k
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467
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Comment: Comment: Percentage Problem
7 weeks ago by jared.andrews07 ★ 17k
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1
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467
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Answer: Answer: Percentage Problem
8 weeks ago by jared.andrews07 ★ 17k
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375
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Answer: Answer: Suggestions for resource for running R training
8 weeks ago by jared.andrews07 ★ 17k
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1
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446
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Answer: Answer: Why Are There Differences in RNA-seq Results?
8 weeks ago by jared.andrews07 ★ 17k
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0
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491
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Comment: Comment: Mageck RRA is listing negative controls as high fold change in the gene summary
9 weeks ago by jared.andrews07 ★ 17k
1
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1
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491
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Answer: Answer: Mageck RRA is listing negative controls as high fold change in the gene summary
9 weeks ago by jared.andrews07 ★ 17k
2
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2
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469
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Comment: Comment: How to account for total number of cells when aggregating for pseudobulk?
10 weeks ago by jared.andrews07 ★ 17k
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0
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306
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Comment: Comment: error in CIBERSORTx
10 weeks ago by jared.andrews07 ★ 17k
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273
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Answer: Answer: Differential expression bias in Seurat
10 weeks ago by jared.andrews07 ★ 17k
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0
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374
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Comment: Comment: single cell RNA sequencing and mitochondrial percent
10 weeks ago by jared.andrews07 ★ 17k
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1
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781
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Comment: Comment: How to identify cell identities in mixed scRNA-seq using mutational signatures f
10 weeks ago by jared.andrews07 ★ 17k
2
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1
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781
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Answer: Answer: How to identify cell identities in mixed scRNA-seq using mutational signatures f
10 weeks ago by jared.andrews07 ★ 17k
2
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1
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365
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Answer: Answer: Understanding dimred in scater for scRNASeq
10 weeks ago by jared.andrews07 ★ 17k
2
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1
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775
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Answer: Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
11 weeks ago by jared.andrews07 ★ 17k
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0
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569
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Comment: Comment: DESeq2_ How to Account for the Expression Levels of a Specific Gene?
11 weeks ago by jared.andrews07 ★ 17k
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0
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569
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Comment: Comment: DESeq2_ How to Account for the Expression Levels of a Specific Gene?
11 weeks ago by jared.andrews07 ★ 17k
2
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1
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569
views
Answer: Answer: DESeq2_ How to Account for the Expression Levels of a Specific Gene?
11 weeks ago by jared.andrews07 ★ 17k
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0
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759
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Answer: Answer: How to find transcription factors list?
11 weeks ago by jared.andrews07 ★ 17k
1
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0
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371
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Answer: Answer: Seurat object with multiple PCAs/UMAPs from different assays
3 months ago by jared.andrews07 ★ 17k
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0
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535
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Comment: Comment: Is there a common acceptance criteria for sample contamination?
3 months ago by jared.andrews07 ★ 17k
1
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0
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578
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Comment: Comment: Pseudobulking per patient
3 months ago by jared.andrews07 ★ 17k
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0
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478
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Answer: Answer: gProfiler vs Panther_go in overrepresentation pathways R analysis
3 months ago by jared.andrews07 ★ 17k
1
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1
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578
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Answer: Answer: Pseudobulking per patient
3 months ago by jared.andrews07 ★ 17k
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1
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535
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Comment: Comment: Is there a common acceptance criteria for sample contamination?
3 months ago by jared.andrews07 ★ 17k
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0
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387
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Answer: Answer: InferCNV results interpretation
3 months ago by jared.andrews07 ★ 17k
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1
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613
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Comment: Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
3 months ago by jared.andrews07 ★ 17k
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1
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613
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Answer: Answer: How to add Ensembl ids after Pseudobulk analysis by DESeq2
3 months ago by jared.andrews07 ★ 17k
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0
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396
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Answer: Answer: Facing problem with single cell rna seq annotation using singleR
updated 3 months ago by 44k • written 3 months ago by ★ 17k
0
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0
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931
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Comment: Comment: Harmony integration group.by.var parameter
3 months ago by jared.andrews07 ★ 17k
1,518 results • Page 1 of 31
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