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Answer: Answer: Figures and plots for integration of ATAC and RNA seq data
8 months ago by jared.andrews07 ★ 19k
3
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977
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Answer: Answer: High Variability when Peak Calling with SEACR
8 months ago by jared.andrews07 ★ 19k
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2.2k
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Answer: Answer: Speed up umap parameter optimisation?
8 months ago by jared.andrews07 ★ 19k
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621
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Answer: Answer: Eigencor plot after limma::removeBatchEffect
8 months ago by jared.andrews07 ★ 19k
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1.3k
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Comment: Comment: How do I annotate cell types in CIBERSORTx when using the scRNA-seq option?
8 months ago by jared.andrews07 ★ 19k
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1.3k
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Answer: Answer: How do I annotate cell types in CIBERSORTx when using the scRNA-seq option?
8 months ago by jared.andrews07 ★ 19k
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Answer: Answer: "precedence" in genomation R package
8 months ago by jared.andrews07 ★ 19k
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2.2k
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Answer: Answer: Preparation needed to get into Bioinformatic field
9 months ago by jared.andrews07 ★ 19k
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1.4k
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Comment: Comment: Finding high number of significant genes by FindMarkers by Seurat
9 months ago by jared.andrews07 ★ 19k
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1.4k
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Answer: Answer: Finding high number of significant genes by FindMarkers by Seurat
9 months ago by jared.andrews07 ★ 19k
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4.1k
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Comment: Comment: How do you estimate time to complete a project or task?
9 months ago by jared.andrews07 ★ 19k
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2
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4.1k
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Answer: Answer: How do you estimate time to complete a project or task?
9 months ago by jared.andrews07 ★ 19k
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1.4k
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Comment: Comment: Issue with CIBERSORTx Error 139
9 months ago by jared.andrews07 ★ 19k
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1.5k
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Comment: Comment: single-cell zeros handling, inputation and filtration
9 months ago by jared.andrews07 ★ 19k
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1.5k
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Comment: Comment: single-cell zeros handling, inputation and filtration
9 months ago by jared.andrews07 ★ 19k
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1.5k
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Comment: Comment: single-cell zeros handling, inputation and filtration
9 months ago by jared.andrews07 ★ 19k
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1.1k
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Answer: Answer: submitting to SRA database
9 months ago by jared.andrews07 ★ 19k
2
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1.5k
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Answer: Answer: single-cell zeros handling, inputation and filtration
9 months ago by jared.andrews07 ★ 19k
1
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0
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951
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Comment: Comment: Flattened TSS enrichment x unique fragments from scATAC experiment
9 months ago by jared.andrews07 ★ 19k
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1
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1.3k
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Answer: Answer: Why only C > A,T,G and T > A,G,C mutations typically considered in 96 SBS contex
9 months ago by jared.andrews07 ★ 19k
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0
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663
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Answer: Answer: What's the point of integrating single cell data of different conditions?
9 months ago by jared.andrews07 ★ 19k
4
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1
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743
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Answer: Answer: MT and rRNA gene expression in bulk RNA-seq sample QC filtering
9 months ago by jared.andrews07 ★ 19k
2
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1.8k
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Comment: Comment: background genes for gene ontology analysis
10 months ago by jared.andrews07 ★ 19k
3
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771
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Answer: Answer: How to Test Statistical Association Between Clusters and Conditions in scRNA-seq
10 months ago by jared.andrews07 ★ 19k
2
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1
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1.2k
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Answer: Answer: Computational way to distinguish between polyA and total RNA bulk RNA-seq
10 months ago by jared.andrews07 ★ 19k
2
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1
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2.1k
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Comment: Comment: Super enhancer calling using ROSE for mm39 genome: list index out of range error
10 months ago by jared.andrews07 ★ 19k
1
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1
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2.1k
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Comment: Comment: Super enhancer calling using ROSE for mm39 genome: list index out of range error
10 months ago by jared.andrews07 ★ 19k
1
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0
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3.7k
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Comment: Comment: question about seurat figure PC_heatmap
10 months ago by jared.andrews07 ★ 19k
1
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2
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2.1k
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Comment: Comment: Super enhancer calling using ROSE for mm39 genome: list index out of range error
10 months ago by jared.andrews07 ★ 19k
1
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1
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1.5k
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Comment: Comment: Database like Cellxgene for well-annotated atlas
10 months ago by jared.andrews07 ★ 19k
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1
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1.5k
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Comment: Comment: Database like Cellxgene for well-annotated atlas
10 months ago by jared.andrews07 ★ 19k
2
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2
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1.5k
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Answer: Answer: Database like Cellxgene for well-annotated atlas
10 months ago by jared.andrews07 ★ 19k
0
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1
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2.1k
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Comment: Comment: Super enhancer calling using ROSE for mm39 genome: list index out of range error
10 months ago by jared.andrews07 ★ 19k
0
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0
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802
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Comment: Comment: RNA seq analysis in R
10 months ago by jared.andrews07 ★ 19k
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1
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802
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Comment: Comment: RNA seq analysis in R
10 months ago by jared.andrews07 ★ 19k
3
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0
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1.7k
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Answer: Answer: How do I start my journey as bioinformatics?
10 months ago by jared.andrews07 ★ 19k
1
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0
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1.1k
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Comment: Comment: Converting metadata.csv file into seurat object
11 months ago by jared.andrews07 ★ 19k
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1
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1.1k
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Comment: Comment: Converting metadata.csv file into seurat object
11 months ago by jared.andrews07 ★ 19k
2
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0
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913
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Comment: Comment: New scRNA-seq analysis software - Web-base - No coding needed
11 months ago by jared.andrews07 ★ 19k
1
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0
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527
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Tool: STRprofiler: efficient comparisons of short tandem repeat profiles for biomedical model authentication
xenograft cell-line model-authentication str-profiling short-tandem-repeats
7 months ago by jared.andrews07 ★ 19k
1
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0
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1.4k
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Comment: Comment: How to include the lane index in STARsolo count matrix barcodes.tsv?
11 months ago by jared.andrews07 ★ 19k
1
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1
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1.4k
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Answer: Answer: How to include the lane index in STARsolo count matrix barcodes.tsv?
11 months ago by jared.andrews07 ★ 19k
1
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0
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3.0k
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Comment: Comment: What is the difference between `possorted_genome_bam.bam` in the output of `cell
11 months ago by jared.andrews07 ★ 19k
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0
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1.3k
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Answer: Answer: Error 137 in Epi2me TB-AMR Workflow
11 months ago by jared.andrews07 ★ 19k
0
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1
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1.3k
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Comment: Comment: Comparing two RNA-seq runs (each has enough replicates) in DESeq2
11 months ago by jared.andrews07 ★ 19k
1
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0
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1000
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Answer: Answer: Method to detect CNV in a large set of coverage profile ?
11 months ago by jared.andrews07 ★ 19k
0
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0
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917
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Comment: Comment: PCA in two similar conditions
11 months ago by jared.andrews07 ★ 19k
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1
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1.1k
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Comment: Comment: sample-specific celltype in integrated data . Biology or batch effect ?
11 months ago by jared.andrews07 ★ 19k
3
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0
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806
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Answer: Answer: What is the reason that all high throughput sequencing data for the human brain
11 months ago by jared.andrews07 ★ 19k
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1
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2.4k
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Comment: Comment: Fast, flexible grep for very large FASTQ files
11 months ago by jared.andrews07 ★ 19k
1,666 results • Page 2 of 34
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