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Answer:
Answer: Trying to understand warning from MACS2 about too few paired peaks and differing
5 months ago by
jared.andrews07
★ 18k
1
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0
replies
973
views
Answer:
Answer: Mouse or Rat Gene Expression Data Similar to GTEx
5 months ago by
jared.andrews07
★ 18k
2
votes
0
replies
966
views
Comment:
Comment: Super ehancers
5 months ago by
jared.andrews07
★ 18k
1
vote
1
reply
966
views
Comment:
Comment: Super ehancers
5 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
595
views
Comment:
Comment: Using ggplotly in R
5 months ago by
jared.andrews07
★ 18k
1
vote
1
reply
595
views
Answer:
Answer: Using ggplotly in R
5 months ago by
jared.andrews07
★ 18k
12
votes
1
reply
656
views
Answer:
Answer: TFs and Gene databases
5 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
538
views
Answer:
Answer: DiffBind: no peaks in DBA
6 months ago by
jared.andrews07
★ 18k
2
votes
1
reply
966
views
Answer:
Answer: Super ehancers
6 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
1.4k
views
Answer:
Answer: What purposes can TPM values be used for?
6 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
537
views
Comment:
Comment: Visualize pathways from MSigDB
6 months ago by
jared.andrews07
★ 18k
2
votes
1
reply
537
views
Answer:
Answer: Visualize pathways from MSigDB
6 months ago by
jared.andrews07
★ 18k
3
votes
1
reply
707
views
Comment:
Comment: Seeking Help with Unexpected MA Plot Output
7 months ago by
jared.andrews07
★ 18k
0
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1
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453
views
Answer:
Answer: Update R in Posit Workbench
7 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
394
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Comment:
Comment: MACS3 or SEACR
7 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
453
views
Comment:
Comment: AUTODOCK TOOLS ERRO
7 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
319
views
Answer:
Answer: Seeking for edgeR TMM Normalization calcul example
7 months ago by
jared.andrews07
★ 18k
2
votes
0
replies
1.1k
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Comment:
Comment: I need a consultation about my workflow.
7 months ago by
jared.andrews07
★ 18k
0
votes
1
reply
873
views
Answer:
Answer: Error when trying to install R package 'scater'
7 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
360
views
Answer:
Answer: Seurat 5 integration
7 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
2.0k
views
Comment:
Comment: Bioinformatics career transition
7 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
365
views
Comment:
Comment: Pathway activity in Bulk-RNA-SEQ analysis
7 months ago by
jared.andrews07
★ 18k
2
votes
1
reply
2.0k
views
Answer:
Answer: Bioinformatics career transition
7 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
733
views
Answer:
Answer: GENERAL R QUESTION: Accessing package versions of an old R object/project?
7 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
526
views
Answer:
Answer: quality control scRNAseq
7 months ago by
jared.andrews07
★ 18k
2
votes
0
replies
541
views
Answer:
Answer: Demonstrating lack of difference between two peaksets
7 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
1.0k
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Comment:
Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
7 months ago by
jared.andrews07
★ 18k
6
votes
6
replies
1.0k
views
Forum:
You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical
thought-experiment
7 months ago by
jared.andrews07
★ 18k
0
votes
1
reply
483
views
Comment:
Comment: DiffBind issue in identification of differentially enriched peaks between two co
8 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
1.0k
views
Comment:
Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
8 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
413
views
Answer:
Answer: Huge TPM values in some tissues of an expression atlas
8 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
714
views
Comment:
Comment: igvShiny issues with loading local bams
8 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
714
views
Comment:
Comment: igvShiny issues with loading local bams
8 months ago by
jared.andrews07
★ 18k
2
votes
0
replies
639
views
Answer:
Answer: PCA plot analysis
8 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
372
views
Comment:
Comment: sinto tool
8 months ago by
jared.andrews07
★ 18k
2
votes
1
reply
793
views
Comment:
Comment: IGV signal visualization, low and high signals
8 months ago by
jared.andrews07
★ 18k
2
votes
1
reply
373
views
Answer:
Answer: Sample clustering from 10X single cell
8 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
613
views
Answer:
Answer: How to add motifs in cellranger-arc reference?
8 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
408
views
Answer:
Answer: Pseudo bulking of scATAC-seq
8 months ago by
jared.andrews07
★ 18k
2
votes
0
replies
807
views
Comment:
Comment: scRNA-seq analysis
8 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
398
views
Comment:
Comment: Question regarding transcript quantification with hybrid seq
9 months ago by
jared.andrews07
★ 18k
0
votes
1
reply
9.7k
views
Comment:
Comment: How to make a complicated dot plot for scRNAseq marker genes with ggplot2?
9 months ago by
jared.andrews07
★ 18k
0
votes
1
reply
2.4k
views
Comment:
Comment: what's the disadvantage of removing cell-cylcle gene compared with regressing ou
9 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
2.3k
views
Comment:
Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
9 months ago by
jared.andrews07
★ 18k
2
votes
2
replies
2.4k
views
Comment:
Comment: what's the disadvantage of removing cell-cylcle gene compared with regressing ou
9 months ago by
jared.andrews07
★ 18k
1
vote
1
reply
2.3k
views
Comment:
Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
9 months ago by
jared.andrews07
★ 18k
0
votes
1
reply
1.1k
views
Comment:
Comment: Help in choosing the right metric for ranking genes in fgsea
9 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
1.0k
views
Comment:
Comment: Seurat Analysis: Deleting cells from seurat object
9 months ago by
jared.andrews07
★ 18k
0
votes
0
replies
1.2k
views
Comment:
Comment: ROSE called super-enhancers overlapping with promoters
9 months ago by
jared.andrews07
★ 18k
1
vote
0
replies
2.3k
views
Comment:
Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
9 months ago by
jared.andrews07
★ 18k
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