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Answer: Answer: Harmony integration group.by.var parameter
17 months ago by jared.andrews07 ★ 19k
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896
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Answer: Answer: Trying to understand warning from MACS2 about too few paired peaks and differing
17 months ago by jared.andrews07 ★ 19k
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Answer: Answer: Mouse or Rat Gene Expression Data Similar to GTEx
17 months ago by jared.andrews07 ★ 19k
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2.2k
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Comment: Comment: Super ehancers
17 months ago by jared.andrews07 ★ 19k
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2.2k
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Comment: Comment: Super ehancers
17 months ago by jared.andrews07 ★ 19k
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1.1k
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Comment: Comment: Using ggplotly in R
17 months ago by jared.andrews07 ★ 19k
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1.1k
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Answer: Answer: Using ggplotly in R
17 months ago by jared.andrews07 ★ 19k
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1.3k
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Answer: Answer: TFs and Gene databases
18 months ago by jared.andrews07 ★ 19k
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1.2k
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Answer: Answer: DiffBind: no peaks in DBA
18 months ago by jared.andrews07 ★ 19k
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2.2k
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Answer: Answer: Super ehancers
18 months ago by jared.andrews07 ★ 19k
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Answer: Answer: What purposes can TPM values be used for?
18 months ago by jared.andrews07 ★ 19k
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1.1k
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Comment: Comment: Visualize pathways from MSigDB
19 months ago by jared.andrews07 ★ 19k
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1.1k
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Answer: Answer: Visualize pathways from MSigDB
19 months ago by jared.andrews07 ★ 19k
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1.9k
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Comment: Comment: Seeking Help with Unexpected MA Plot Output
19 months ago by jared.andrews07 ★ 19k
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1.0k
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Answer: Answer: Update R in Posit Workbench
19 months ago by jared.andrews07 ★ 19k
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747
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Comment: Comment: MACS3 or SEACR
19 months ago by jared.andrews07 ★ 19k
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940
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Comment: Comment: AUTODOCK TOOLS ERRO
19 months ago by jared.andrews07 ★ 19k
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624
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Answer: Answer: Seeking for edgeR TMM Normalization calcul example
19 months ago by jared.andrews07 ★ 19k
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1.9k
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Comment: Comment: I need a consultation about my workflow.
19 months ago by jared.andrews07 ★ 19k
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1
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1.8k
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Answer: Answer: Error when trying to install R package 'scater'
19 months ago by jared.andrews07 ★ 19k
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737
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Answer: Answer: Seurat 5 integration
19 months ago by jared.andrews07 ★ 19k
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6.9k
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Comment: Comment: Bioinformatics career transition
19 months ago by jared.andrews07 ★ 19k
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705
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Comment: Comment: Pathway activity in Bulk-RNA-SEQ analysis
19 months ago by jared.andrews07 ★ 19k
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1
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6.9k
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Answer: Answer: Bioinformatics career transition
19 months ago by jared.andrews07 ★ 19k
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2.0k
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Answer: Answer: GENERAL R QUESTION: Accessing package versions of an old R object/project?
19 months ago by jared.andrews07 ★ 19k
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1.0k
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Answer: Answer: quality control scRNAseq
19 months ago by jared.andrews07 ★ 19k
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1.0k
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Answer: Answer: Demonstrating lack of difference between two peaksets
19 months ago by jared.andrews07 ★ 19k
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1.8k
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Comment: Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
20 months ago by jared.andrews07 ★ 19k
6
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6
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1.8k
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Forum: You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical thought-experiment
20 months ago by jared.andrews07 ★ 19k
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841
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Comment: Comment: DiffBind issue in identification of differentially enriched peaks between two co
20 months ago by jared.andrews07 ★ 19k
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0
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1.8k
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Comment: Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
20 months ago by jared.andrews07 ★ 19k
1
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0
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819
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Answer: Answer: Huge TPM values in some tissues of an expression atlas
20 months ago by jared.andrews07 ★ 19k
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0
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1.5k
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Comment: Comment: igvShiny issues with loading local bams
20 months ago by jared.andrews07 ★ 19k
1
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0
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1.5k
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Comment: Comment: igvShiny issues with loading local bams
20 months ago by jared.andrews07 ★ 19k
2
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0
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1.3k
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Answer: Answer: PCA plot analysis
20 months ago by jared.andrews07 ★ 19k
1
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0
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727
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Comment: Comment: sinto tool
20 months ago by jared.andrews07 ★ 19k
2
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1
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1.5k
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Comment: Comment: IGV signal visualization, low and high signals
20 months ago by jared.andrews07 ★ 19k
2
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1
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814
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Answer: Answer: Sample clustering from 10X single cell
20 months ago by jared.andrews07 ★ 19k
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0
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1.4k
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Answer: Answer: How to add motifs in cellranger-arc reference?
20 months ago by jared.andrews07 ★ 19k
1
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0
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812
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Answer: Answer: Pseudo bulking of scATAC-seq
20 months ago by jared.andrews07 ★ 19k
2
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0
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1.7k
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Comment: Comment: scRNA-seq analysis
21 months ago by jared.andrews07 ★ 19k
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0
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711
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Comment: Comment: Question regarding transcript quantification with hybrid seq
21 months ago by jared.andrews07 ★ 19k
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1
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13k
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Comment: Comment: How to make a complicated dot plot for scRNAseq marker genes with ggplot2?
21 months ago by jared.andrews07 ★ 19k
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1
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4.7k
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Comment: Comment: what's the disadvantage of removing cell-cylcle gene compared with regressing ou
21 months ago by jared.andrews07 ★ 19k
1
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0
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2.9k
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Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
21 months ago by jared.andrews07 ★ 19k
2
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2
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4.7k
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Comment: Comment: what's the disadvantage of removing cell-cylcle gene compared with regressing ou
21 months ago by jared.andrews07 ★ 19k
1
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1
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2.9k
views
Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
21 months ago by jared.andrews07 ★ 19k
0
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1
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3.2k
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Comment: Comment: Help in choosing the right metric for ranking genes in fgsea
21 months ago by jared.andrews07 ★ 19k
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0
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1.9k
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Comment: Comment: Seurat Analysis: Deleting cells from seurat object
21 months ago by jared.andrews07 ★ 19k
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0
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2.8k
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Comment: Comment: ROSE called super-enhancers overlapping with promoters
21 months ago by jared.andrews07 ★ 19k
1,666 results • Page 5 of 34
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