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Comment: Comment: Integrate transcriptomics and CNV
2.1 years ago by jared.andrews07 ★ 19k
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Answer: Answer: Typical Volcano Plot for DGE
2.1 years ago by jared.andrews07 ★ 19k
2
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1.3k
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Answer: Answer: Integrate transcriptomics and CNV
2.1 years ago by jared.andrews07 ★ 19k
1
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11k
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Answer: Answer: Help with DiffBind Generating report-based DBA object... Error: No valid contras
2.1 years ago by jared.andrews07 ★ 19k
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3.4k
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Comment: Comment: Heatmap for ATAC-seq
2.1 years ago by jared.andrews07 ★ 19k
2
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2
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3.4k
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Answer: Answer: Heatmap for ATAC-seq
2.1 years ago by jared.andrews07 ★ 19k
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3.7k
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Comment: Comment: Leiden algorithm not working R studio scRNAseq
2.2 years ago by jared.andrews07 ★ 19k
4
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5.6k
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Answer: Answer: Set up label.color with the same colors as the cluster colors in Seurat DimPlot(
2.2 years ago by jared.andrews07 ★ 19k
2
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1
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3.7k
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Answer: Answer: Leiden algorithm not working R studio scRNAseq
2.2 years ago by jared.andrews07 ★ 19k
1
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1
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5.6k
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Comment: Comment: Set up label.color with the same colors as the cluster colors in Seurat DimPlot(
2.2 years ago by jared.andrews07 ★ 19k
1
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0
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5.0k
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Comment: Comment: Interpret plots from DiffBind
2.2 years ago by jared.andrews07 ★ 19k
1
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0
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999
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Answer: Answer: Peak calling a general bed file (not reads)
2.3 years ago by jared.andrews07 ★ 19k
1
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0
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893
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Comment: Comment: How to extract one Seurat object from an RDS file.
2.3 years ago by jared.andrews07 ★ 19k
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1
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5.0k
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Comment: Comment: Interpret plots from DiffBind
2.3 years ago by jared.andrews07 ★ 19k
1
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1
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5.0k
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Comment: Comment: Interpret plots from DiffBind
2.3 years ago by jared.andrews07 ★ 19k
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0
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1.5k
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Comment: Comment: CHiP-Seq Questions
2.3 years ago by jared.andrews07 ★ 19k
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2.4k
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Comment: Comment: On "wings" in volcano plots...
2.3 years ago by jared.andrews07 ★ 19k
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0
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3.7k
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Comment: Comment: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
2.4 years ago by jared.andrews07 ★ 19k
0
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0
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3.7k
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Answer: Answer: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
2.4 years ago by jared.andrews07 ★ 19k
3
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1
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1.2k
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Answer: Answer: Does ROSE include traditional enhancer in the analysis output?
2.4 years ago by jared.andrews07 ★ 19k
1
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0
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3.7k
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Answer: Answer: How can I make all my PCA plots the same shape using ggplots?
2.4 years ago by jared.andrews07 ★ 19k
1
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0
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1.4k
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Answer: Answer: Why can’t we have full-length transcripts with droplet-based technologies ?
2.5 years ago by jared.andrews07 ★ 19k
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0
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2.8k
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Comment: Comment: ExomeDepth installation error
2.5 years ago by jared.andrews07 ★ 19k
1
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1
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2.8k
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Comment: Comment: ExomeDepth installation error
2.5 years ago by jared.andrews07 ★ 19k
1
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1
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2.8k
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Answer: Answer: ExomeDepth installation error
2.5 years ago by jared.andrews07 ★ 19k
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0
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1.0k
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Comment: Comment: Databases for cell lines
2.5 years ago by jared.andrews07 ★ 19k
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1
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1.0k
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News: Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude hackathon
2.5 years ago by jared.andrews07 ★ 19k
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0
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1.0k
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Answer: Answer: Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15t
2.5 years ago by jared.andrews07 ★ 19k
0
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0
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1.1k
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Answer: Answer: If using singeR return more clusters than available ones should I do reclusterin
2.5 years ago by jared.andrews07 ★ 19k
3
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1
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932
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Answer: Answer: How to quantify the reads of each peak for ChIP-seq data?
2.6 years ago by jared.andrews07 ★ 19k
2
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0
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1.2k
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Answer: Answer: How to quantify the reads of peaks?
2.6 years ago by jared.andrews07 ★ 19k
3
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0
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1.8k
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Answer: Answer: Can FPKM data sets be of any use or are they trash?
2.6 years ago by jared.andrews07 ★ 19k
1
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0
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1.2k
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Comment: Comment: Error in measuring percentage of mit.genes
2.6 years ago by jared.andrews07 ★ 19k
3
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1
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2.3k
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Answer: Answer: Use single cell sequencing bam file to tell if a patient has a mutation
2.6 years ago by jared.andrews07 ★ 19k
0
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1
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3.2k
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Comment: Comment: RDS file in Rstudio
2.6 years ago by jared.andrews07 ★ 19k
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0
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2.4k
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Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
2.6 years ago by jared.andrews07 ★ 19k
0
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0
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2.4k
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Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
2.6 years ago by jared.andrews07 ★ 19k
1
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0
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2.4k
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Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
2.6 years ago by jared.andrews07 ★ 19k
0
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0
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766
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Answer: Answer: Pearson correlation coefficients of histone modifications at specific region
2.6 years ago by jared.andrews07 ★ 19k
0
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0
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724
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Comment: Comment: How do I edit chromosome names or delete some chromosomes in assembly (FASTA) an
2.6 years ago by jared.andrews07 ★ 19k
1
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0
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1.7k
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Answer: Answer: singleR annotation shows overlapping clusters
2.6 years ago by jared.andrews07 ★ 19k
2
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0
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825
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Answer: Answer: Normalizing chip-seq signals with different number of peaks
2.6 years ago by jared.andrews07 ★ 19k
2
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1
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1.9k
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Answer: Answer: extracting input files form Seurat
2.6 years ago by jared.andrews07 ★ 19k
3
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0
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925
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Answer: Answer: Do I need to correct for sequencing depth in bulk RNA seq?
2.6 years ago by jared.andrews07 ★ 19k
2
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0
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1.6k
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Answer: Answer: Processed RNA seq data publicly available
2.7 years ago by jared.andrews07 ★ 19k
0
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0
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1.6k
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Answer: Answer: What is the best way to convert gene symbols into ensembl and other ids in Pytho
2.7 years ago by jared.andrews07 ★ 19k
0
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0
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2.3k
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Comment: Comment: How do I subset data in R with a list of variable names?
2.7 years ago by jared.andrews07 ★ 19k
2
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1
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2.3k
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Answer: Answer: How do I subset data in R with a list of variable names?
2.7 years ago by jared.andrews07 ★ 19k
1
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1
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8.9k
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Comment: Comment: CUT&Tag data processing: peak caller choice and typical peak size profile
2.7 years ago by jared.andrews07 ★ 19k
1
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2
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8.9k
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Comment: Comment: CUT&Tag data processing: peak caller choice and typical peak size profile
2.7 years ago by jared.andrews07 ★ 19k
1,663 results • Page 8 of 34
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