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112
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Answer: Answer: DiffBind: no peaks in DBA
3 hours ago by jared.andrews07 ★ 16k
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103
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Answer: Answer: Super ehancers
8 hours ago by jared.andrews07 ★ 16k
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135
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Answer: Answer: What purposes can TPM values be used for?
8 hours ago by jared.andrews07 ★ 16k
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337
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Comment: Comment: Visualize pathways from MSigDB
27 days ago by jared.andrews07 ★ 16k
2
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1
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337
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Answer: Answer: Visualize pathways from MSigDB
27 days ago by jared.andrews07 ★ 16k
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424
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Comment: Comment: Seeking Help with Unexpected MA Plot Output
4 weeks ago by jared.andrews07 ★ 16k
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1
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244
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Answer: Answer: Update R in Posit Workbench
5 weeks ago by jared.andrews07 ★ 16k
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211
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Comment: Comment: MACS3 or SEACR
5 weeks ago by jared.andrews07 ★ 16k
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214
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Comment: Comment: AUTODOCK TOOLS ERRO
5 weeks ago by jared.andrews07 ★ 16k
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0
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211
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Answer: Answer: Seeking for edgeR TMM Normalization calcul example
6 weeks ago by jared.andrews07 ★ 16k
2
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0
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710
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Comment: Comment: I need a consultation about my workflow.
6 weeks ago by jared.andrews07 ★ 16k
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1
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478
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Answer: Answer: Error when trying to install R package 'scater'
6 weeks ago by jared.andrews07 ★ 16k
1
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0
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217
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Answer: Answer: Seurat 5 integration
6 weeks ago by jared.andrews07 ★ 16k
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710
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Comment: Comment: Bioinformatics career transition
7 weeks ago by jared.andrews07 ★ 16k
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245
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Comment: Comment: Pathway activity in Bulk-RNA-SEQ analysis
7 weeks ago by jared.andrews07 ★ 16k
2
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1
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710
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Answer: Answer: Bioinformatics career transition
7 weeks ago by jared.andrews07 ★ 16k
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254
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Answer: Answer: GENERAL R QUESTION: Accessing package versions of an old R object/project?
7 weeks ago by jared.andrews07 ★ 16k
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0
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339
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Answer: Answer: quality control scRNAseq
7 weeks ago by jared.andrews07 ★ 16k
2
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0
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374
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Answer: Answer: Demonstrating lack of difference between two peaksets
7 weeks ago by jared.andrews07 ★ 16k
0
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0
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779
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Comment: Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
8 weeks ago by jared.andrews07 ★ 16k
6
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6
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779
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Forum: You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical thought-experiment
8 weeks ago by jared.andrews07 ★ 16k
0
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1
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336
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Comment: Comment: DiffBind issue in identification of differentially enriched peaks between two co
8 weeks ago by jared.andrews07 ★ 16k
0
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0
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779
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Comment: Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
8 weeks ago by jared.andrews07 ★ 16k
1
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0
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281
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Answer: Answer: Huge TPM values in some tissues of an expression atlas
8 weeks ago by jared.andrews07 ★ 16k
0
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0
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434
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Comment: Comment: igvShiny issues with loading local bams
9 weeks ago by jared.andrews07 ★ 16k
1
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0
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434
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Comment: Comment: igvShiny issues with loading local bams
9 weeks ago by jared.andrews07 ★ 16k
2
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0
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390
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Answer: Answer: PCA plot analysis
9 weeks ago by jared.andrews07 ★ 16k
1
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0
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237
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Comment: Comment: sinto tool
10 weeks ago by jared.andrews07 ★ 16k
2
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1
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490
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Comment: Comment: IGV signal visualization, low and high signals
10 weeks ago by jared.andrews07 ★ 16k
2
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1
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234
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Answer: Answer: Sample clustering from 10X single cell
10 weeks ago by jared.andrews07 ★ 16k
0
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0
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362
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Answer: Answer: How to add motifs in cellranger-arc reference?
10 weeks ago by jared.andrews07 ★ 16k
1
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0
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260
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Answer: Answer: Pseudo bulking of scATAC-seq
11 weeks ago by jared.andrews07 ★ 16k
2
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0
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538
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Comment: Comment: scRNA-seq analysis
12 weeks ago by jared.andrews07 ★ 16k
0
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0
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282
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Comment: Comment: Question regarding transcript quantification with hybrid seq
12 weeks ago by jared.andrews07 ★ 16k
0
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1
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8.2k
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Comment: Comment: How to make a complicated dot plot for scRNAseq marker genes with ggplot2?
3 months ago by jared.andrews07 ★ 16k
0
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1
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1.6k
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Comment: Comment: what's the disadvantage of removing cell-cylcle gene compared with regressing ou
3 months ago by jared.andrews07 ★ 16k
1
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0
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1.9k
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Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
3 months ago by jared.andrews07 ★ 16k
2
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2
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1.6k
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Comment: Comment: what's the disadvantage of removing cell-cylcle gene compared with regressing ou
3 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
1.9k
views
Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
3 months ago by jared.andrews07 ★ 16k
0
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1
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582
views
Comment: Comment: Help in choosing the right metric for ranking genes in fgsea
3 months ago by jared.andrews07 ★ 16k
0
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0
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632
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Comment: Comment: Seurat Analysis: Deleting cells from seurat object
3 months ago by jared.andrews07 ★ 16k
0
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0
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588
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Comment: Comment: ROSE called super-enhancers overlapping with promoters
3 months ago by jared.andrews07 ★ 16k
1
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0
replies
1.9k
views
Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
3 months ago by jared.andrews07 ★ 16k
1
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1
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711
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Comment: Comment: Bio-informatics Scientist at BASF | Nunhems (Near Eindhoven, The Netherlands)
3 months ago by jared.andrews07 ★ 16k
1
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0
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541
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Comment: Comment: batch effect correction in 10x genomics single cell sequencing
3 months ago by jared.andrews07 ★ 16k
1
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2
replies
588
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Answer: Answer: ROSE called super-enhancers overlapping with promoters
3 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
1.9k
views
Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
3 months ago by jared.andrews07 ★ 16k
2
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0
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397
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Comment: Comment: best pipeline for Paired scATAC-seq and scRNA-seq in the same cell - bioinformat
3 months ago by jared.andrews07 ★ 16k
1
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1
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685
views
Comment: Comment: No tumour cells in clustering of tumor sample?!
3 months ago by jared.andrews07 ★ 16k
0
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1
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685
views
Comment: Comment: No tumour cells in clustering of tumor sample?!
3 months ago by jared.andrews07 ★ 16k
1,459 results • Page 1 of 30
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