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replies
3.6k
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Answer:
A: Plotting the expression of some genes across time points
6.5 years ago by
Tm
★ 1.1k
2
votes
2
replies
6.4k
views
Answer:
A: RNA-seq: How to know which paired reads come from the same original fragment?
6.5 years ago by
Tm
★ 1.1k
0
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1
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2.2k
views
Answer:
A: stringTie Warning message
6.5 years ago by
Tm
★ 1.1k
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0
replies
3.8k
views
Answer:
A: Transcript_id to gene_name
6.5 years ago by
Tm
★ 1.1k
1
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1
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4.2k
views
Answer:
C: biom convert is not working
6.5 years ago by
Tm
★ 1.1k
0
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0
replies
3.4k
views
Answer:
A: Align Reads from PacBio
6.5 years ago by
Tm
★ 1.1k
0
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1
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2.1k
views
Answer:
A: QIIME filter_fasta.py not removing chimeric sequences
6.5 years ago by
Tm
★ 1.1k
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0
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1.8k
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Answer:
A: How do you use BLAST?
6.5 years ago by
Tm
★ 1.1k
1
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0
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7.1k
views
Answer:
A: BLAST+ error: No alias or index file found for nucleotide database
6.5 years ago by
Tm
★ 1.1k
1
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0
replies
3.5k
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Answer:
A: counting after aligning miRNA reads to miRBase mature miRNA instead of reference
6.5 years ago by
Tm
★ 1.1k
1
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0
replies
1.0k
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Answer:
A: How to find singletons in get_homologues
6.5 years ago by
Tm
★ 1.1k
3
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0
replies
17k
views
Answer:
A: How to extract specific rows based on row number from a file
6.5 years ago by
Tm
★ 1.1k
0
votes
1
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1.7k
views
Answer:
A: problem for setting BWA arguments for alignment
6.5 years ago by
Tm
★ 1.1k
1
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0
replies
877
views
Answer:
A: Using the same read library to scaffold read tracked contigs
6.5 years ago by
Tm
★ 1.1k
1
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0
replies
1.4k
views
Answer:
A: How to extract ampliconID from a bed file of each called variant from a vcf?
6.5 years ago by
Tm
★ 1.1k
1
vote
2
replies
6.3k
views
Answer:
A: Whole-genome alignment of two or more bacterial genomes - find structural varian
6.5 years ago by
Tm
★ 1.1k
1
vote
0
replies
5.1k
views
Answer:
A: bedtools - getfasta: How to report both 'chrom:start-stop and' 'name' of sequenc
6.5 years ago by
Tm
★ 1.1k
1
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1
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2.6k
views
Answer:
A: confused about how to run pipeline
6.5 years ago by
Tm
★ 1.1k
0
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1
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7.6k
views
Answer:
A: Calculate Mapping Rate for an alignment to each sequence of a multi-fasta refere
6.5 years ago by
Tm
★ 1.1k
0
votes
2
replies
1.5k
views
Answer:
A: DB downloaded error
6.5 years ago by
Tm
★ 1.1k
0
votes
1
reply
1.9k
views
Answer:
A: Question: Unmapped reads at TCGA bam files
6.5 years ago by
Tm
★ 1.1k
0
votes
1
reply
1.4k
views
Answer:
A: Any RNASeq dataset with large number of replicates out there?
6.5 years ago by
Tm
★ 1.1k
2
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0
replies
6.1k
views
Answer:
A: Generating pileup from .bam file
6.5 years ago by
Tm
★ 1.1k
0
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1
reply
1.2k
views
Answer:
A: Using dbcAmplicons Low pairing of reads from 16s rRNA data based on Illumina
6.5 years ago by
Tm
★ 1.1k
0
votes
0
replies
3.7k
views
Answer:
A: Removing Indices using Cutadapt
6.5 years ago by
Tm
★ 1.1k
1
vote
1
reply
1.5k
views
Answer:
A: CNV details about the normal samples?
6.5 years ago by
Tm
★ 1.1k
1
vote
1
reply
3.0k
views
Answer:
A: unknown trimmer in trimmomatic software
6.6 years ago by
Tm
★ 1.1k
1
vote
0
replies
1.6k
views
Answer:
A: SNP Calling of a single bacterial gene
6.6 years ago by
Tm
★ 1.1k
1
vote
1
reply
4.6k
views
Answer:
A: Reference Guided De Novo assembly of Contigs generated from Illumina PE Reads
6.6 years ago by
Tm
★ 1.1k
0
votes
0
replies
4.6k
views
Answer:
A: Filter variants in vcf file according to genotype of particular samples?
6.6 years ago by
Tm
★ 1.1k
1
vote
1
reply
1.9k
views
Answer:
A: OrthoMCL VS MEGA aligned clusters
6.6 years ago by
Tm
★ 1.1k
1
vote
1
reply
3.0k
views
Answer:
A: infer top level go category from GO:ID
6.6 years ago by
Tm
★ 1.1k
0
votes
1
reply
5.0k
views
Answer:
A: How to align genomes on Mauve
6.9 years ago by
Tm
★ 1.1k
0
votes
2
replies
2.1k
views
Answer:
A: HOw to modify the description line 1 of a fastaq file to match with third line?
updated 6.9 years ago by
GenoMax
147k • written 6.9 years ago by
Tm
★ 1.1k
0
votes
1
reply
2.5k
views
Answer:
A: Error in TRinity
updated 6.9 years ago by
GenoMax
147k • written 6.9 years ago by
Tm
★ 1.1k
0
votes
0
replies
1.9k
views
Answer:
A: quality filtering error usearch
6.9 years ago by
Tm
★ 1.1k
1
vote
0
replies
1.9k
views
Answer:
A: denovo assembly combining multiple data sets
6.9 years ago by
Tm
★ 1.1k
2
votes
1
reply
2.1k
views
Answer:
A: velvetg failed during the assembly
6.9 years ago by
Tm
★ 1.1k
2
votes
1
reply
2.2k
views
Answer:
A: how to get the strand from a blast xml file
6.9 years ago by
Tm
★ 1.1k
1
vote
1
reply
6.3k
views
Answer:
A: SNP Analysis of bacterial genomes
6.9 years ago by
Tm
★ 1.1k
0
votes
1
reply
3.7k
views
Answer:
A: sam to bam conversion problem
6.9 years ago by
Tm
★ 1.1k
1
vote
0
replies
1.2k
views
Answer:
A: making a custom reference
6.9 years ago by
Tm
★ 1.1k
1
vote
0
replies
1.6k
views
Answer:
A: Problem with loacting gtf file
6.9 years ago by
Tm
★ 1.1k
1
vote
1
reply
6.3k
views
Answer:
A: best kmer for genome size estimation
6.9 years ago by
Tm
★ 1.1k
0
votes
0
replies
2.6k
views
Answer:
A: Issue with StringTie to get gene_count matrix for DeSEQ
6.9 years ago by
Tm
★ 1.1k
1
vote
0
replies
3.2k
views
Answer:
A: How to create consensus from bam file without IUPAC code?
6.9 years ago by
Tm
★ 1.1k
1
vote
1
reply
1.8k
views
Answer:
A: Does anyone know good open data sources for metagenomic data linked to a given
7.3 years ago by
Tm
★ 1.1k
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