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Comment: C: Error in Retrieving Sequence from NCBI from Biopython
9.9 years ago by GouthamAtla 12k
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Comment: C: Contig length distribution plotting with R
9.9 years ago by GouthamAtla 12k
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13k
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understanding pysam pileup()
pysam pileup
updated 3.3 years ago by 45k • written 9.9 years ago by 12k
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4.1k
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Comment: C: BioJava: How to get All frame 1 to 6 of DNA to Protein translation for All Genet
9.9 years ago by GouthamAtla 12k
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3.7k
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Comment: C: Generate two haplotypes from bam and vcf
9.9 years ago by GouthamAtla 12k
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6
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3.7k
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Generate two haplotypes from bam and vcf
freebayes GATK SNP vcf
9.9 years ago by GouthamAtla 12k
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1
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3.4k
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Comment: C: Cuffdiff: FPKM values of Genes also appearing among isoforms (but with different
9.9 years ago by GouthamAtla 12k
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1
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3.7k
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Comment: C: Generate two haplotypes from bam and vcf
9.9 years ago by GouthamAtla 12k
0
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0
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3.7k
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Comment: C: Generate two haplotypes from bam and vcf
9.9 years ago by GouthamAtla 12k
0
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1
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3.8k
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Comment: C: Best online biological dictionary/glossary?
9.9 years ago by GouthamAtla 12k
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1
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2.8k
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Comment: C: Annotation of Zebrafish pri-miRNAs promoters and CAGE-seq detected active Drosha
9.9 years ago by GouthamAtla 12k
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3.3k
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Comment: C: How to get rid of adapter contamination in the middle of the read
9.9 years ago by GouthamAtla 12k
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3.8k
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Comment: C: How to show my chosen SNPs on the UCSC genome browser?
9.9 years ago by GouthamAtla 12k
2
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1.8k
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Comment: C: Heat map using publicly available dataset
10.0 years ago by GouthamAtla 12k
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4.0k
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Comment: C: How To Use Biological Replicates For Allele Specific Analysis Using Heterozygous
10.0 years ago by GouthamAtla 12k
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2
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5.0k
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handling PCR duplicate reads ?
RNA-Seq ChIP-Seq
updated 3.3 years ago by 45k • written 10.0 years ago by 12k
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2.1k
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Answer: Answer: Modify Fasta headers
updated 3.3 years ago by 45k • written 10.0 years ago by 12k
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1
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8.8k
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Answer: A: Finding Chip Seq Overlaps with Bed files
10.0 years ago by GouthamAtla 12k
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1
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2.0k
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Comment: C: Extracting sequences from frequency matrix
10.0 years ago by GouthamAtla 12k
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0
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3.9k
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Comment: C: Methods for differential allele-specific expression?
10.0 years ago by GouthamAtla 12k
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0
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1.5k
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Comment: C: Bowtie query position
10.0 years ago by GouthamAtla 12k
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1
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3.7k
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Comment: C: Getting read counts per loci
10.0 years ago by GouthamAtla 12k
2
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1
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7.5k
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Comment: C: How to find overlapping regions among three bed files
10.0 years ago by GouthamAtla 12k
1
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1
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2.6k
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Comment: C: All the CIGAR strings of reads mapped by Bowtie are "I"
10.0 years ago by GouthamAtla 12k
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1
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5.3k
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Comment: C: Get multiple snps coverage (allelic depth) from bam files
10.0 years ago by GouthamAtla 12k
1
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1
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5.3k
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Comment: C: Get multiple snps coverage (allelic depth) from bam files
10.0 years ago by GouthamAtla 12k
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0
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4.8k
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Comment: C: abyss-pe and abyss-map
10.0 years ago by GouthamAtla 12k
1
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1
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5.2k
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Answer: A: macs2 "Effective genome size" for repetitive genomes
10.0 years ago by GouthamAtla 12k
3
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1
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2.2k
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Answer: A: get rid of redundant reads in BOWTIE2
10.0 years ago by GouthamAtla 12k
1
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0
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24k
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Comment: C: How does sliding window work in Trimmomatic
10.0 years ago by GouthamAtla 12k
66
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5
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8.4k
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10 follow
Tutorial: Informatics of RNA-Seq.
next-gen RNA-Seq
updated 3.1 years ago by 45k • written 10.3 years ago by 12k
1
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0
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1.6k
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Comment: C: 3K Rice Genome Assembly
10.0 years ago by GouthamAtla 12k
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1
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3.2k
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Comment: C: Confusion: Whether to proceed further with Ion Proton exome data
10.1 years ago by GouthamAtla 12k
0
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1
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3.2k
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Comment: C: Confusion: Whether to proceed further with Ion Proton exome data
10.1 years ago by GouthamAtla 12k
0
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0
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14k
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Comment: C: Downloading all pdb files from RCSB
10.1 years ago by GouthamAtla 12k
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3.4k
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Comment: C: Which .gtf file should I use when aligning/counting total RNA?
10.1 years ago by GouthamAtla 12k
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0
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2.5k
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Comment: C: Finding public ChIP-seq data for various tissue types
10.1 years ago by GouthamAtla 12k
0
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1
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3.4k
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Comment: C: Which .gtf file should I use when aligning/counting total RNA?
10.1 years ago by GouthamAtla 12k
0
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0
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4.2k
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Comment: Comment: Bowtie2 classification of discordantly mapped pairs
updated 3.2 years ago by 45k • written 10.1 years ago by 12k
1
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1
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14k
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Answer: A: Downloading all pdb files from RCSB
10.1 years ago by GouthamAtla 12k
0
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1
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4.2k
views
Comment: Comment: Bowtie2 classification of discordantly mapped pairs
updated 3.2 years ago by 45k • written 10.1 years ago by 12k
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0
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2.7k
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Answer: A: Cufflinks - novel genes when using GFF file
10.1 years ago by GouthamAtla 12k
1
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1
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1.6k
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Comment: C: getting a various rna-seq data sets for ecoli
10.1 years ago by GouthamAtla 12k
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0
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3.0k
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Comment: C: fastqToCA command in Celera Assembler
10.1 years ago by GouthamAtla 12k
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1
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3.0k
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Comment: Comment: fastqToCA command in Celera Assembler
updated 3.2 years ago by 45k • written 10.1 years ago by 12k
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0
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2.3k
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Comment: C: ChickPea DEG Analysis
10.1 years ago by GouthamAtla 12k
0
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2
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15k
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Comment: Comment: Counting number of genes using htseq-count tool.
updated 3.2 years ago by 45k • written 10.1 years ago by 12k
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1
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2.3k
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Comment: C: ChickPea DEG Analysis
10.1 years ago by GouthamAtla 12k
1
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1
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6.0k
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Answer: A: Extracting specific sequences from a big fasta file using ids of the sequences t
10.2 years ago by GouthamAtla 12k
2
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1
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5.5k
views
Answer: Answer: How to embed Jmol and Cytoscape in a webpage?
updated 3.2 years ago by 45k • written 10.2 years ago by 12k
1,492 results • Page 18 of 30
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