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6
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0
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12k
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Answer: Answer: what is the Hiseq 2000 adaptor sequences
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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0
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3.6k
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Answer: Answer: How to merge replicates of mapped reads out of Tophat for pathview and gage anal
updated 4.0 years ago by 45k • written 10.8 years ago by 12k
4
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0
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7.7k
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Answer: Answer: tophat, the parameter "Expected inner distance between mate pairs"?
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
2
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1
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7.4k
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Answer: Answer: As an illumina customer, do you use basespace, alternative cloud solution or pip
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
1
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1
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2.0k
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Answer: Answer: Help with samtools command
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
5
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1
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3.3k
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Answer: Answer: Biostars 3.0 under development. Visitor location is now displayed with a widget.
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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1
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9.7k
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Comment: C: join non-overlapping paired-end reads
10.8 years ago by GouthamAtla 12k
0
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1
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9.7k
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Comment: Comment: join non-overlapping paired-end reads
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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2
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9.7k
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Comment: C: join non-overlapping paired-end reads
10.8 years ago by GouthamAtla 12k
2
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3
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14k
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Answer: Answer: Extract several sequences from genome in FASTA format with genomic coordinates.
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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0
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18k
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Comment: Comment: Multisample VCF file to Structure file format ?
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
7
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8
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18k
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Multisample VCF file to Structure file format ?
vcf structure population-genetics
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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1
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5.1k
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Comment: Comment: 【tophat】 RNA-seq mapping reference genome
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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2
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5.1k
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Answer: Answer: 【tophat】 RNA-seq mapping reference genome
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
2
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0
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3.0k
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Comment: C: Finding mutations conferring antibiotic resistance
10.8 years ago by GouthamAtla 12k
0
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1
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6.4k
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Comment: Comment: Bedtools Multiiter to compare multiple bed files?
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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0
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5.5k
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Comment: Comment: [MACS] IndexError: list index out of range
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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0
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24k
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Comment: Comment: Can someone please explain in simple terms how DESeq2 works?
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
1
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0
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2.0k
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Answer: A: Consistent FPKM counts
10.8 years ago by GouthamAtla 12k
1
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0
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12k
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Comment: Comment: Mapping Illumina reads against one single gene
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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0
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12k
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Comment: Comment: Mapping Illumina reads against one single gene
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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1
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12k
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Comment: Comment: Mapping Illumina reads against one single gene
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
1
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2
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12k
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Answer: Answer: Mapping Illumina reads against one single gene
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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0
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12k
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Comment: Comment: Mapping Illumina reads against one single gene
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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1
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6.4k
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Answer: Answer: Bedtools Multiiter to compare multiple bed files?
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
1
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0
replies
11k
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Comment: Comment: Tophat error : Error: gtf_to_fasta returned an error.
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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1
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3.6k
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Comment: C: Alternative microarray analysis
10.8 years ago by GouthamAtla 12k
0
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1
reply
5.5k
views
Comment: Comment: [MACS] IndexError: list index out of range
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
1
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2
replies
5.5k
views
Answer: Answer: [MACS] IndexError: list index out of range
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
2
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1
reply
3.5k
views
Answer: A: Error in code
10.8 years ago by GouthamAtla 12k
0
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0
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3.6k
views
Comment: Comment: Samtools MPILEUP on single-end/paired-end data
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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1
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11k
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Comment: Comment: Tophat error : Error: gtf_to_fasta returned an error.
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
0
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0
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3.5k
views
Comment: C: Query related to generating plots from HOMER output
10.8 years ago by GouthamAtla 12k
2
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1
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5.9k
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Answer: A: a problem with peak annotation after ChIP-seq
10.8 years ago by GouthamAtla 12k
1
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2
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11k
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Answer: Answer: Tophat error : Error: gtf_to_fasta returned an error.
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
1
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0
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5.0k
views
Comment: C: Piping samtools commands
10.8 years ago by GouthamAtla 12k
1
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1
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5.0k
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Answer: A: Piping samtools commands
10.8 years ago by GouthamAtla 12k
0
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0
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22k
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Answer: A: Extract sequence with header from a fasta file with specific ID given in another
10.8 years ago by GouthamAtla 12k
4
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0
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2.2k
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Answer: Answer: Questions : Data management of whole exome sequencing
updated 3.6 years ago by 45k • written 10.8 years ago by 12k
1
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0
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4.6k
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Answer: Answer: Multiple sequence alignment and editing following consensus sequence generation
updated 3.8 years ago by 45k • written 10.8 years ago by 12k
0
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1
reply
28k
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Comment: C: bash loop for alignment RNA-seq data
10.9 years ago by GouthamAtla 12k
1
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0
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3.0k
views
Answer: A: Calling consesus from BAM file into a fasta
10.9 years ago by GouthamAtla 12k
2
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3
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3.0k
views
Calling consesus from BAM file into a fasta
SNP mpileup samtools
updated 3.7 years ago by 45k • written 10.9 years ago by 12k
0
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2
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158k
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Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
10.9 years ago by GouthamAtla 12k
0
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1
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11k
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Comment: Comment: trim galore and cutadapt software errors
updated 3.7 years ago by 45k • written 10.9 years ago by 12k
0
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0
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3.5k
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Comment: Comment: Dfference between intersectBed and multiIntersectBed
updated 3.7 years ago by 45k • written 10.9 years ago by 12k
0
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1
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3.5k
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Comment: Comment: Dfference between intersectBed and multiIntersectBed
updated 3.7 years ago by 45k • written 10.9 years ago by 12k
1
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0
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2.5k
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Comment: Comment: Reference Genome file for assembly
updated 3.7 years ago by 45k • written 10.9 years ago by 12k
0
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1
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2.7k
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Answer: Answer: What happens to heterozygous sites when you go from reference sequence to sequen
updated 3.7 years ago by 45k • written 10.9 years ago by 12k
1
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0
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3.0k
views
Answer: Answer: How to find list of genes nearest to list of intronic sequences
updated 3.7 years ago by 45k • written 10.9 years ago by 12k
1,492 results • Page 26 of 30
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