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Answer:
Answer: How to import a gtf file in R so that it appears in tabular format as if it were
15 months ago by
acvill
▴ 350
1
vote
0
replies
796
views
Answer:
Answer: Find a known motif in new sequences
15 months ago by
acvill
▴ 350
3
votes
1
reply
833
views
Answer:
Answer: Is there a way to prove that two VCFs came from the same person?
16 months ago by
acvill
▴ 350
0
votes
1
reply
868
views
Answer:
Answer: prevalence and detection threshold of core microbiome
16 months ago by
acvill
▴ 350
1
vote
1
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969
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Comment:
Comment: phage genome submission in ncbi genebank
17 months ago by
acvill
▴ 350
0
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0
replies
729
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Answer:
Answer: Peaks annotation on bacterial genome
17 months ago by
acvill
▴ 350
8
votes
2
replies
1.3k
views
What is the NCBI's definition of an "atypical genome"?
NCBI
genome
annotation
updated 19 months ago by
MirianT_NCBI
▴ 760 • written 19 months ago by
acvill
▴ 350
0
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2
replies
1.4k
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Comment:
Comment: SKAT in R
19 months ago by
acvill
▴ 350
0
votes
0
replies
1.6k
views
Comment:
Comment: implementation of k-mer counting from krakenuniq to kraken2
20 months ago by
acvill
▴ 350
1
vote
0
replies
802
views
Answer:
Answer: qtl, eqtl, sqtl
22 months ago by
acvill
▴ 350
1
vote
1
reply
824
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Answer:
Answer: Is there a R equivalent of ete3 reconcile?
22 months ago by
acvill
▴ 350
2
votes
1
reply
2.4k
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Answer:
Answer: R is assigning unique identifier to the same column names when reading in as a d
22 months ago by
acvill
▴ 350
4
votes
0
replies
847
views
Answer:
Answer: Why some reads have MAPQ = 0 with bwa and look good?
23 months ago by
acvill
▴ 350
2
votes
0
replies
2.0k
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Comment:
Comment: GO and KEGG enrichment analysis for non-model organism
23 months ago by
acvill
▴ 350
0
votes
2
replies
1.0k
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Comment:
Comment: Assigning an name based on matching three possible cells/columns
23 months ago by
acvill
▴ 350
0
votes
1
reply
1.2k
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Comment:
Comment: Remove rRNA for RNA-Seq Analysis
24 months ago by
acvill
▴ 350
1
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0
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4.7k
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Comment:
Comment: downloading genomes in fasta format from accession ids
24 months ago by
acvill
▴ 350
0
votes
0
replies
1.3k
views
Answer:
Answer: Filtering a fasta file based on blast results file
2.0 years ago by
acvill
▴ 350
1
vote
0
replies
614
views
Answer:
Answer: Why 6mA data are always 41 bps long?
2.1 years ago by
acvill
▴ 350
1
vote
0
replies
755
views
Answer:
Answer: R programming
2.2 years ago by
acvill
▴ 350
0
votes
0
replies
799
views
Comment:
Comment: working piRNA prediction tools
2.2 years ago by
acvill
▴ 350
2
votes
0
replies
1.1k
views
Comment:
Comment: How to split two rows in multiples row in R
2.2 years ago by
acvill
▴ 350
4
votes
1
reply
833
views
Where to find an asymmetric nucleotide substitution matrix with IUPAC encoding?
Bioconductor
tidyverse
sequence-alignment
R
Biostrings
2.2 years ago by
acvill
▴ 350
3
votes
0
replies
833
views
Answer:
Answer: Where to find an asymmetric nucleotide substitution matrix with IUPAC encoding?
2.2 years ago by
acvill
▴ 350
1
vote
1
reply
972
views
Comment:
Comment: Duplication genes in Mitochondrial genome ?
2.3 years ago by
acvill
▴ 350
0
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0
replies
1.1k
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Comment:
Comment: why bowtie2 doesn’t report longer than 500bp inserts?
2.4 years ago by
acvill
▴ 350
1
vote
0
replies
1.2k
views
Comment:
Comment: Bulk RNA-seq with genome but without gene annotation
2.4 years ago by
acvill
▴ 350
3
votes
1
reply
1.1k
views
Answer:
Answer: why bowtie2 doesn’t report longer than 500bp inserts?
2.4 years ago by
acvill
▴ 350
1
vote
0
replies
985
views
Comment:
Comment: conditional count of occurrence in R
2.5 years ago by
acvill
▴ 350
2
votes
1
reply
985
views
Answer:
Answer: conditional count of occurrence in R
2.5 years ago by
acvill
▴ 350
0
votes
0
replies
22k
views
Comment:
Comment: how to rearrange fasta file according to its length
2.6 years ago by
acvill
▴ 350
1
vote
0
replies
512
views
Comment:
Comment: metagenomics analysis
2.7 years ago by
acvill
▴ 350
0
votes
1
reply
1.8k
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Answer:
Answer: MetaPhlAn Visualization using stacked barplot
2.8 years ago by
acvill
▴ 350
2
votes
1
reply
1.1k
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Answer:
Answer: Difference between LIGR-seq and PARIS methods
2.8 years ago by
acvill
▴ 350
0
votes
0
replies
42k
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Comment:
Comment: Transform a GTF file into a data frame in R
3.0 years ago by
acvill
▴ 350
0
votes
1
reply
42k
views
Answer:
Answer: Transform a GTF file into a data frame in R
3.0 years ago by
acvill
▴ 350
0
votes
0
replies
2.6k
views
Comment:
Comment: Count strand-specific 5' / 3' coverage across whole genome for paired-end fragme
3.1 years ago by
acvill
▴ 350
3
votes
3
replies
2.6k
views
Count strand-specific 5' / 3' coverage across whole genome for paired-end fragments
bedtools
RNA-seq
bam
strand-specific
3.1 years ago by
acvill
▴ 350
2
votes
0
replies
2.6k
views
Answer:
Answer: Count strand-specific 5' / 3' coverage across whole genome for paired-end fragme
3.1 years ago by
acvill
▴ 350
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