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Comment: Comment: Any tutorial how to "link" SNPs with genes?
4 weeks ago by dthorbur ▴ 450
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391
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Answer: Answer: How to map genomic sequence to protein functions or domains?
4 weeks ago by dthorbur ▴ 450
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257
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Comment: Comment: Estimating Nucleotide diversity (Pi) from VCF file in polyploid organism (tetrap
4 weeks ago by dthorbur ▴ 450
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639
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Answer: Answer: Guppy basecaller
5 weeks ago by dthorbur ▴ 450
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484
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Comment: Comment: Number of allelic depths is larger than number of inferred alleles in VCF file
5 weeks ago by dthorbur ▴ 450
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217
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Answer: Answer: Variant depth cut off - justification
5 weeks ago by dthorbur ▴ 450
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385
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Length bias is resequenced DNA GO analysis
ontology GO bias DNA
updated 7 weeks ago by 98k • written 7 weeks ago by ▴ 450
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385
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Comment: Comment: Length bias is resequenced DNA GO analysis
7 weeks ago by dthorbur ▴ 450
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317
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Comment: Comment: Ortholog assembly and extraction
9 weeks ago by dthorbur ▴ 450
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443
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Comment: Comment: HaplotypeCaller GENOTYPE GIVEN ALLELES doesn't genotype given alleles
9 weeks ago by dthorbur ▴ 450
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401
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Comment: Comment: How much reads per cell for fusion detection with Nanopore ?
9 weeks ago by dthorbur ▴ 450
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479
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Comment: Comment: Tissue-dependent usage of exons
10 weeks ago by dthorbur ▴ 450
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292
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Comment: Comment: SRA prefetch error
10 weeks ago by dthorbur ▴ 450
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479
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Comment: Comment: Tissue-dependent usage of exons
10 weeks ago by dthorbur ▴ 450
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2
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479
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Answer: Answer: Tissue-dependent usage of exons
10 weeks ago by dthorbur ▴ 450
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284
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Comment: Comment: bacterial identification from WGS long reads.
10 weeks ago by dthorbur ▴ 450
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296
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Comment: Comment: Outgroup for phylogeny
11 weeks ago by dthorbur ▴ 450
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1
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398
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Answer: Answer: Sample Level Filtering During GATK Germline Short Variant Discovery
11 weeks ago by dthorbur ▴ 450
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1
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320
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Comment: Comment: change the axis scale in mds plot
11 weeks ago by dthorbur ▴ 450
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481
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Comment: Comment: Nextflow: [E::bwa_idx_load_from_disk] fail to locate the index files
11 weeks ago by dthorbur ▴ 450
1
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0
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479
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Comment: Comment: Using vcfR to group variants per annotations
12 weeks ago by dthorbur ▴ 450
2
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1
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479
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Answer: Answer: Using vcfR to group variants per annotations
12 weeks ago by dthorbur ▴ 450
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245
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Tools for identifying trans-splicing from long read data
splicing read nanopore long trans-splicing
12 weeks ago by dthorbur ▴ 450
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238
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Comment: Comment: analysing nanopore amplicon data
12 weeks ago by dthorbur ▴ 450
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685
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Comment: Comment: package ‘GenomeInfoDb’ could not be loaded
12 weeks ago by dthorbur ▴ 450
2
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0
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323
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Comment: Comment: How to find all of the new RNA splices from bulk RNA-seq data?
12 weeks ago by dthorbur ▴ 450
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1
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296
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Comment: Comment: Structural variants identified from same reads / assembly
3 months ago by dthorbur ▴ 450
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1
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446
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Comment: Comment: Filter out overlapping deletions from a VCF file.
3 months ago by dthorbur ▴ 450
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1
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446
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Comment: Comment: Filter out overlapping deletions from a VCF file.
3 months ago by dthorbur ▴ 450
2
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1
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443
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Comment: Comment: HaplotypeCaller GENOTYPE GIVEN ALLELES doesn't genotype given alleles
3 months ago by dthorbur ▴ 450
1
vote
1
reply
401
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Comment: Comment: How much reads per cell for fusion detection with Nanopore ?
3 months ago by dthorbur ▴ 450
0
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0
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605
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Comment: Comment: SNP calling
3 months ago by dthorbur ▴ 450
0
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0
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553
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Comment: Comment: Gene ontology with locus tags
3 months ago by dthorbur ▴ 450
0
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1
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605
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Comment: Comment: SNP calling
3 months ago by dthorbur ▴ 450
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0
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281
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Comment: Comment: Remove duplicates in multifasta, where entries are paired
3 months ago by dthorbur ▴ 450
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0
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550
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Comment: Comment: Trimmomatic
3 months ago by dthorbur ▴ 450
1
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2
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553
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Comment: Comment: Gene ontology with locus tags
3 months ago by dthorbur ▴ 450
1
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294
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Comment: Comment: tools that align sequences in mouse and human
3 months ago by dthorbur ▴ 450
1
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0
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380
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Comment: Comment: How can I analyze a genome with no annotation in NCBI Genebank
11 months ago by dthorbur ▴ 450
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0
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637
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Comment: Comment: Automating pipeline with Parallel, read files in separate folders
11 months ago by dthorbur ▴ 450
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0
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402
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Comment: Comment: UTR from gff format
12 months ago by dthorbur ▴ 450
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0
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288
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Answer: Answer: Genome Fasta and compatible tss region database
12 months ago by dthorbur ▴ 450
1
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0
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525
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Comment: Comment: Compare VCFs against background frequencies
12 months ago by dthorbur ▴ 450
0
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0
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281
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Comment: Comment: Correlation between RNA -seq and ChIP-seq
12 months ago by dthorbur ▴ 450
1
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0
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401
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Comment: Comment: SNP and Phenotype Correlation
12 months ago by dthorbur ▴ 450
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0
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357
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Comment: Comment: Running synteny of 2 strain.
12 months ago by dthorbur ▴ 450
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1
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401
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Comment: Comment: SNP and Phenotype Correlation
12 months ago by dthorbur ▴ 450
1
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1
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347
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Comment: Comment: SV on single-end data
12 months ago by dthorbur ▴ 450
2
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1
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758
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Comment: Comment: Assesing contaminants sequences from long genomic contigs
12 months ago by dthorbur ▴ 450
2
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1
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758
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Answer: Answer: Assesing contaminants sequences from long genomic contigs
12 months ago by dthorbur ▴ 450
121 results • Page 1 of 3
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