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Comment:
C: Does StringTie need strand information if HISAT2 was run with strand-specific in
4.2 years ago by
piyushjo
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2.5k
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Comment:
C: Are liger or Seurat CCA good strategies for multiple scRNA-seq data integration?
4.3 years ago by
piyushjo
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6.5k
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Comment:
C: Single cell clutering after regressing out cell cycle effect using seurat
4.6 years ago by
piyushjo
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4.8k
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Comment:
C: HISAT2 index building
4.7 years ago by
piyushjo
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2
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1
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1.3k
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Comment:
C: lncRNA and circular RNA identification softwares
4.7 years ago by
piyushjo
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4.4k
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Comment:
C: How to filter out the non-coding genes?
4.7 years ago by
piyushjo
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5.1k
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Comment:
C: scRNA-seq analysis of two data-sets
4.7 years ago by
piyushjo
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1
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5.1k
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Comment:
C: scRNA-seq analysis of two data-sets
4.7 years ago by
piyushjo
▴ 700
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1
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6.5k
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Comment:
C: Single cell clutering after regressing out cell cycle effect using seurat
4.7 years ago by
piyushjo
▴ 700
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1.1k
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Comment:
C: Extracting important gene with similar expression level from multiple samples
4.7 years ago by
piyushjo
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3.0k
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Comment:
C: GenBank accesion number to gene id
4.7 years ago by
piyushjo
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3.0k
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Comment:
C: GenBank accesion number to gene id
4.7 years ago by
piyushjo
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1.3k
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Comment:
C: Find similar values in two gene lists
4.8 years ago by
piyushjo
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1.3k
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Comment:
C: Find similar values in two gene lists
4.8 years ago by
piyushjo
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3.5k
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Comment:
C: Best way to address different batches of RNA-seq
4.8 years ago by
piyushjo
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4.1k
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Comment:
C: what is inverse normalized RNA-seq expression and how to do that?
5.2 years ago by
piyushjo
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1
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2.5k
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Comment:
C: Comparing stranded reads to unstranded reads
5.3 years ago by
piyushjo
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1
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2.5k
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Comment:
C: Comparing stranded reads to unstranded reads
5.3 years ago by
piyushjo
▴ 700
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1
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2.5k
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Comment:
C: Comparing stranded reads to unstranded reads
5.3 years ago by
piyushjo
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3.0k
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Comment:
C: Tips for network prediction: WGCNA vs ARACNE (or MINET)
5.4 years ago by
piyushjo
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1
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2.3k
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Comment:
C: RNA-strandness of single cell library prep methods
5.4 years ago by
piyushjo
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1
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3.2k
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Comment:
C: Creating interaction network using cytoscape
5.4 years ago by
piyushjo
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2.3k
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Comment:
C: RNA-strandness of single cell library prep methods
5.4 years ago by
piyushjo
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2.3k
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Comment:
C: RNA-strandness of single cell library prep methods
5.4 years ago by
piyushjo
▴ 700
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2.3k
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Comment:
C: RNA-strandness of single cell library prep methods
5.4 years ago by
piyushjo
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1
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1
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3.3k
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Comment:
C: Analysis Without Replicates
5.4 years ago by
piyushjo
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1
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3.3k
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Comment:
C: Analysis Without Replicates
5.4 years ago by
piyushjo
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2
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5.6k
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Comment:
C: how do I split fastq from SRA?
5.6 years ago by
piyushjo
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1.1k
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Comment:
C: DE Gene List to Regulatory Network
5.6 years ago by
piyushjo
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1
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1.6k
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Comment:
C: Conservation between mouse and human genes: form ensembl gene id?
5.6 years ago by
piyushjo
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1
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1.6k
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Comment:
C: Conservation between mouse and human genes: form ensembl gene id?
5.6 years ago by
piyushjo
▴ 700
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1.1k
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Comment:
C: Is it okay to remove uncharacterised transcripts from downstream analysis in RNA
5.7 years ago by
piyushjo
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0
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1.6k
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Comment:
C: Proper design for DESeq2 and other RNAseq general questions
5.7 years ago by
piyushjo
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1
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2.6k
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Comment:
C: FASTQ file: duplicated sequences and overall poor quality
5.7 years ago by
piyushjo
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0
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2.6k
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Comment:
C: DESeq2 comparison of normalized counts from different experiments
5.7 years ago by
piyushjo
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1
vote
1
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4.5k
views
Comment:
C: Multiple probe for same gene
5.7 years ago by
piyushjo
▴ 700
1
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1
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4.5k
views
Comment:
C: Multiple probe for same gene
5.7 years ago by
piyushjo
▴ 700
0
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1
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4.5k
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Comment:
C: Multiple probe for same gene
5.7 years ago by
piyushjo
▴ 700
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3.7k
views
Comment:
C: What can I use to identify primer sequences in my fasta files?
5.7 years ago by
piyushjo
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0
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1
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2.6k
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Comment:
C: FASTQ file: duplicated sequences and overall poor quality
5.7 years ago by
piyushjo
▴ 700
0
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0
replies
2.6k
views
Comment:
C: FASTQ file: duplicated sequences and overall poor quality
5.7 years ago by
piyushjo
▴ 700
0
votes
1
reply
2.6k
views
Comment:
C: FASTQ file: duplicated sequences and overall poor quality
5.7 years ago by
piyushjo
▴ 700
0
votes
1
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1.7k
views
Comment:
C: Difference in FPKM values of lncRNA when using different annotation files
5.8 years ago by
piyushjo
▴ 700
0
votes
0
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24k
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Comment:
C: R - Multiple boxplots
5.8 years ago by
piyushjo
▴ 700
0
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1
reply
24k
views
Comment:
C: R - Multiple boxplots
5.8 years ago by
piyushjo
▴ 700
0
votes
1
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24k
views
Comment:
C: R - Multiple boxplots
5.8 years ago by
piyushjo
▴ 700
1
vote
0
replies
2.0k
views
Comment:
C: Cytoscape network view problem: running out of memory
5.8 years ago by
piyushjo
▴ 700
0
votes
1
reply
2.0k
views
Comment:
C: Cytoscape network view problem: running out of memory
5.8 years ago by
piyushjo
▴ 700
0
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1
reply
2.5k
views
Comment:
C: gffread conversion leaves gene_id
updated 6.0 years ago by
Kevin Blighe
88k • written 6.0 years ago by
piyushjo
▴ 700
0
votes
0
replies
1.2k
views
Comment:
C: Primary assembly or patches: what to choose for making index file?
6.1 years ago by
piyushjo
▴ 700
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