User: young_bioinformatician

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Posts by young_bioinformatician

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Comment: C: What is the process after mapping ?
... Im a grad student. Actually, this is a homework which was given by my advisor. And he didnt say anything about it. He just said that you just pull reference genome and rna-seq from the database and you need to some tools, like tophat2, bowtie, and cufflinks. And Im trying to find out this workflow a ...
written 5 days ago by young_bioinformatician0
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Comment: C: What is the process after mapping ?
... Well, how can i make functinonal annotation through these files ? I mean, it is not a de novo assembly. Because i have a reference. Sorry, im a newbie on this field. ...
written 5 days ago by young_bioinformatician0
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What is the process after mapping ?
... Hi guys, I have a raw data, which is rna-seq paired end. I have downloaded genome reference from ncbi. Then, I have mapped rna seq to genome reference through tophat2. I had some results like accepted.hits.bam. After this process, I used the cufflinks for assembly. Finally, I have a transcripts.gtf ...
assembly alignment written 5 days ago by young_bioinformatician0 • updated 4 days ago by Vijay Lakhujani2.7k
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Comment: C: About bioinformatics thesis
... Yeah, I agree with you. So, I will want him to change my thesis. Thank you very much. ...
written 10 weeks ago by young_bioinformatician0
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About bioinformatics thesis
... Hi guys, I am a master student that I am in first semester. Now, My thesis hasn't been determined yet. Im gonna work on bioinformatics topic. But My advisor told me that your thesis may be about graphical user interface of specific bioinformatics tool. This tool,which just works on Linux command li ...
rna-seq written 10 weeks ago by young_bioinformatician0 • updated 10 weeks ago by Sishuo Wang130

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