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2
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298
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Answer: Answer: How To Choose Metagenomics Function annotation : Reads-based v.s. Contigs-based
4 weeks ago by young_bioinformatician ▴ 190
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0
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139
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How to handle KEGG orthologous IDs involved multiple pathways
KEGG annotation metagenome functional gene
3 months ago by young_bioinformatician ▴ 190
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1
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409
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Comment: Comment: Further Reducing Gene Ontology list
6 months ago by young_bioinformatician ▴ 190
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0
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538
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Comment: Comment: How to combine eggnog and interproscan
6 months ago by young_bioinformatician ▴ 190
0
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2
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538
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How to combine eggnog and interproscan
pfam eggnog blast interproscan annotation
6 months ago by young_bioinformatician ▴ 190
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0
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3.1k
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Comment: Comment: Paired end reads merged to single end for mapping - should i allow multi-overlap
6 months ago by young_bioinformatician ▴ 190
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0
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550
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Comment: Comment: long view SNPs in vcf file
6 months ago by young_bioinformatician ▴ 190
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0
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550
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Comment: Comment: long view SNPs in vcf file
6 months ago by young_bioinformatician ▴ 190
3
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4
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550
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long view SNPs in vcf file
Calling Variant freebayes SNP vcftools bcftools
6 months ago by young_bioinformatician ▴ 190
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0
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420
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Comment: Comment: Change ploidy level in vcf file
updated 7 months ago by 2.7k • written 7 months ago by ▴ 190
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2
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420
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Change ploidy level in vcf file
vcf freebayes SNP vcftools bcftools
updated 7 months ago by 2.7k • written 7 months ago by ▴ 190
0
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0
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187
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How to manage GO terms for metagenomics
GO metagenome annotation ontology Gene functions
7 months ago by young_bioinformatician ▴ 190
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0
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990
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Comment: Comment: How to create a basic GUI for rna seq pipeline
7 months ago by young_bioinformatician ▴ 190
0
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1
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854
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Comment: Comment: Fasta headers column spilt or selection
8 months ago by young_bioinformatician ▴ 190
0
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0
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359
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Comment: Comment: variant analysis using Freebayes
8 months ago by young_bioinformatician ▴ 190
0
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0
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338
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Comment: Comment: Error loading a bam + bai files in IGV
8 months ago by young_bioinformatician ▴ 190
0
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0
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518
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Comment: Comment: When to use Genome assembly and when to use short read alignment for consensus g
8 months ago by young_bioinformatician ▴ 190
0
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0
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922
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Comment: Comment: PLINK - individual variance with the SNPs weights
8 months ago by young_bioinformatician ▴ 190
0
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1
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922
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Comment: Comment: PLINK - individual variance with the SNPs weights
8 months ago by young_bioinformatician ▴ 190
0
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1
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922
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Comment: Comment: PLINK - individual variance with the SNPs weights
8 months ago by young_bioinformatician ▴ 190
3
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6
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922
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PLINK - individual variance with the SNPs weights
plink snp variant population pca
8 months ago by young_bioinformatician ▴ 190
0
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1
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510
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Comment: Comment: Normalization after Trimmomatic ?
11 months ago by young_bioinformatician ▴ 190
0
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0
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212
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How to (or not to) interpret the annotation abundance result from metagenome
gene abundance GO annotation metagenome
11 months ago by young_bioinformatician ▴ 190
0
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0
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946
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Answer: Answer: MG RAST for Eukaryota
12 months ago by young_bioinformatician ▴ 190
0
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0
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426
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Comment: Comment: Considering two and more variation in polyploidy
12 months ago by young_bioinformatician ▴ 190
0
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1
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426
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Comment: Comment: Considering two and more variation in polyploidy
12 months ago by young_bioinformatician ▴ 190
0
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4
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426
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Considering two and more variation in polyploidy
Population SNP Variant genomic Calling
12 months ago by young_bioinformatician ▴ 190
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0
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441
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Comment: Comment: PCA biplot for SNPs data
15 months ago by young_bioinformatician ▴ 190
0
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2
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441
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PCA biplot for SNPs data
SNP Calling PCA Variant
15 months ago by young_bioinformatician ▴ 190
0
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0
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698
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Comment: C: IDBA-UD Output Question
2.8 years ago by young_bioinformatician ▴ 190
0
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0
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848
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Comment: C: Missing pseudogenes in annotation report
2.9 years ago by young_bioinformatician ▴ 190
1
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1
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848
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Comment: C: Missing pseudogenes in annotation report
2.9 years ago by young_bioinformatician ▴ 190
1
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1
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848
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Comment: C: Missing pseudogenes in annotation report
2.9 years ago by young_bioinformatician ▴ 190
0
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0
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1.4k
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Comment: A: Comparing SPAdes assemblies to each other?
2.9 years ago by young_bioinformatician ▴ 190
0
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1
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956
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Comment: C: Why one genome assembly is more fragmented than others?
2.9 years ago by young_bioinformatician ▴ 190
0
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0
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1.5k
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Answer: A: Display bootstraps on tree RAxML-NG
2.9 years ago by young_bioinformatician ▴ 190
0
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0
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700
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Comment: C: Find transcripts of one species in RNA-assembly
2.9 years ago by young_bioinformatician ▴ 190
2
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1
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749
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Answer: A: reorder contigs into scaffold?
2.9 years ago by young_bioinformatician ▴ 190
0
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1
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1.9k
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Comment: C: Is the ssGSEA enrichment score affected by other samples in the analysis group?
2.9 years ago by young_bioinformatician ▴ 190
1
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2
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700
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Comment: C: Find transcripts of one species in RNA-assembly
2.9 years ago by young_bioinformatician ▴ 190
2
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0
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2.0k
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Answer: A: RAxML generate best tree from 500 bootstrap trees
2.9 years ago by young_bioinformatician ▴ 190
0
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1
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602
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Comment: C: Constructing reference-based draft genome
2.9 years ago by young_bioinformatician ▴ 190
1
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3
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602
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Constructing reference-based draft genome
Assembly genome next-gen
2.9 years ago by young_bioinformatician ▴ 190
0
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1
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511
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Comment: C: Local BLAST search
3.0 years ago by young_bioinformatician ▴ 190
0
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0
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892
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Answer: A: script bash for counting
3.0 years ago by young_bioinformatician ▴ 190
1
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0
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676
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Answer: A: KEGG mapping for larger sample size (100) ?
3.0 years ago by young_bioinformatician ▴ 190
5
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1
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5.2k
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Answer: A: How to filter BLAST results by query coverage? How to analyze large BLAST output
3.0 years ago by young_bioinformatician ▴ 190
0
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0
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2.2k
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Comment: A: Direction in GSEA in clusterProfiler
3.0 years ago by young_bioinformatician ▴ 190
0
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0
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539
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Answer: A: Make a reference transcriptome for nonmodel organism
3.0 years ago by young_bioinformatician ▴ 190
1
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1
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2.0k
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Comment: C: Gene alignment with IGV
3.0 years ago by young_bioinformatician ▴ 190
66 results • Page 1 of 2
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