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0
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1
reply
258
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Comment:
Comment: Reformatting Merged and Unmerged Paired-End Files
6 weeks ago by
young_bioinformatician
▴ 230
0
votes
3
replies
258
views
Reformatting Merged and Unmerged Paired-End Files
illumina
fastp
fastqc
bbmap
updated 6 weeks ago by
GenoMax
141k • written 6 weeks ago by
young_bioinformatician
▴ 230
5
votes
5
replies
1.3k
views
long view SNPs in vcf file
bcftools
Variant-Calling
SNP
freebayes
vcftools
updated 7 weeks ago by
yzliu01
▴ 10 • written 17 months ago by
young_bioinformatician
▴ 230
1
vote
0
replies
385
views
Comment:
Comment: Guided genome assembly
10 weeks ago by
young_bioinformatician
▴ 230
0
votes
1
reply
410
views
Comment:
Comment: eggNOG versus Diamond blastp
11 weeks ago by
young_bioinformatician
▴ 230
0
votes
0
replies
291
views
Answer:
Answer: Multimapped and unique mapped for BAM file of RRBS data
11 weeks ago by
young_bioinformatician
▴ 230
1
vote
3
replies
410
views
eggNOG versus Diamond blastp
diamond
eggNOG
protein
functional
updated 11 weeks ago by
Dunois
★ 2.5k • written 11 weeks ago by
young_bioinformatician
▴ 230
1
vote
2
replies
606
views
How to manage GO terms for metagenomics
metagenome
gene-ontology
GO
updated 12 weeks ago by
geneontologyhelp
▴ 390 • written 18 months ago by
young_bioinformatician
▴ 230
2
votes
1
reply
301
views
Answer:
Answer: move fasta and fastq files with the same name folder
12 weeks ago by
young_bioinformatician
▴ 230
0
votes
0
replies
908
views
Answer:
Answer: How to produce "publication quality figures" for MAGs from environmental samples
3 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
6
votes
23
replies
1.4k
views
How to speed Salmon index up
metagenome
genome
salmon
3 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.4k
views
Answer:
Answer: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
0
votes
2
replies
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
1.4k
views
Comment:
Comment: How to speed Salmon index up
3 months ago by
young_bioinformatician
▴ 230
1
vote
2
replies
431
views
Answer:
Answer: Transcript Based Annotation of Variants Using Annovar
3 months ago by
young_bioinformatician
▴ 230
2
votes
1
reply
877
views
Answer:
Answer: How To Choose Metagenomics Function annotation : Reads-based v.s. Contigs-based
12 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
336
views
How to handle KEGG orthologous IDs involved multiple pathways
KEGG
annotation
metagenome
functional
gene
14 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
773
views
Comment:
Comment: Further Reducing Gene Ontology list
17 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
1.1k
views
Comment:
Comment: How to combine eggnog and interproscan
17 months ago by
young_bioinformatician
▴ 230
0
votes
2
replies
1.1k
views
How to combine eggnog and interproscan
pfam
eggnog
blast
interproscan
annotation
17 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
3.6k
views
Comment:
Comment: Paired end reads merged to single end for mapping - should i allow multi-overlap
17 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
1.3k
views
Comment:
Comment: long view SNPs in vcf file
17 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
1.3k
views
Comment:
Comment: long view SNPs in vcf file
17 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
644
views
Comment:
Comment: Change ploidy level in vcf file
updated 18 months ago by
4galaxy77
2.8k • written 18 months ago by
young_bioinformatician
▴ 230
0
votes
2
replies
644
views
Change ploidy level in vcf file
vcf
freebayes
SNP
vcftools
bcftools
updated 18 months ago by
4galaxy77
2.8k • written 18 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
2.0k
views
Comment:
Comment: How to create a basic GUI for rna seq pipeline
18 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.5k
views
Comment:
Comment: Fasta headers column spilt or selection
19 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
655
views
Comment:
Comment: variant analysis using Freebayes
19 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
804
views
Comment:
Comment: Error loading a bam + bai files in IGV
19 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
899
views
Comment:
Comment: When to use Genome assembly and when to use short read alignment for consensus g
19 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
1.9k
views
Comment:
Comment: PLINK - individual variance with the SNPs weights
19 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.9k
views
Comment:
Comment: PLINK - individual variance with the SNPs weights
19 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
1.9k
views
Comment:
Comment: PLINK - individual variance with the SNPs weights
19 months ago by
young_bioinformatician
▴ 230
3
votes
6
replies
1.9k
views
PLINK - individual variance with the SNPs weights
plink
snp
variant
population
pca
19 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
853
views
Comment:
Comment: Normalization after Trimmomatic ?
22 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
365
views
How to (or not to) interpret the annotation abundance result from metagenome
gene
abundance
GO
annotation
metagenome
22 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
1.2k
views
Answer:
Answer: MG RAST for Eukaryota
23 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
702
views
Comment:
Comment: Considering two and more variation in polyploidy
23 months ago by
young_bioinformatician
▴ 230
0
votes
1
reply
702
views
Comment:
Comment: Considering two and more variation in polyploidy
24 months ago by
young_bioinformatician
▴ 230
0
votes
4
replies
702
views
Considering two and more variation in polyploidy
Population
SNP
Variant
genomic
Calling
23 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
702
views
Comment:
Comment: PCA biplot for SNPs data
2.1 years ago by
young_bioinformatician
▴ 230
0
votes
2
replies
702
views
PCA biplot for SNPs data
SNP
Calling
PCA
Variant
2.1 years ago by
young_bioinformatician
▴ 230
0
votes
0
replies
884
views
Comment:
C: IDBA-UD Output Question
3.7 years ago by
young_bioinformatician
▴ 230
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