User: sunnykevin97

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sunnykevin9750
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Posts by sunnykevin97

<prev • 111 results • page 1 of 12 • next >
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Comment: C: How to sum the genewise counts in edgeR ?
... Thanks for the informative code. ...
written 5 days ago by sunnykevin9750
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How to sum the genewise counts in edgeR ?
... HI How to sum the gene-wise counts in edge R for differential genes comparing 2 groups. Looking for two-group comparison with n=2 in each group. I'm new to R literally struck. suggestion please. The tabulate matrix looks some thing like this temp Test Sample GeneI Gene2 Gene2 Gene3 .. ...
R rna-seq written 6 days ago by sunnykevin9750 • updated 6 days ago by rpolicastro720
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Comment: C: Voom Unormalised vs Normalised logCPM ?
... ![normalization][1] [1]: https://i.ibb.co/N90M7sR/voomnormalisation.png%22%20alt=%22voomnormalisation%22%20border=%220%22%20/%3E ...
written 10 days ago by sunnykevin9750
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Comment: C: Gene starts with "LOC" prefix ?
... How do I run a batchmode using esearch ? I had morethan 1000 geneID's in a file, using the above command. Suggestions please. ...
written 12 days ago by sunnykevin9750
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Comment: C: Voom Unormalised vs Normalised logCPM ?
... 1- logcounts 2 - voom normalised log2 counts v$E ...
written 15 days ago by sunnykevin9750
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Voom Unormalised vs Normalised logCPM ?
... HI I did the normalization and plotted the box-plots, I didn't find any difference. Both the plots looks same, I followed steps as given in the manual. Suggestions please. https://ibb.co/Dfn5bzd ...
rna-seq written 15 days ago by sunnykevin9750
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How to Interpreting voom : Mean-variance trend ?
... HI Just started with Differential gene expression analysis with sample size 30, I'm unable to interpret the results.Can you please interpret the results from the plots, some suggestions please. **From exercise:** ![from excercise][1] **From my data:** ![From my data][2] [1]: https://i.ibb.co ...
limma rna-seq voom written 16 days ago by sunnykevin9750 • updated 16 days ago by h.mon30k
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Comment: C: how to format the featurecounts output ?
... Problem with my csv file. I understand were it went wrong. Thanks for the suggestions. ...
written 16 days ago by sunnykevin9750
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Comment: C: how to format the featurecounts output ?
... Now it make sense. Thanks. ...
written 17 days ago by sunnykevin9750
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Comment: C: how to format the featurecounts output ?
... I used the same standard cmd why their is chr name repeating in other columns, some suggestions. ...
written 17 days ago by sunnykevin9750

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Centurion 17 days ago, created 100 posts.
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