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2
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0
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191
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Comment: Comment: How do I run pal2nal.pl in batch mode ?
18 hours ago by sunnykevin97 ▴ 790
2
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0
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13k
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Comment: Comment: How To Do Alignment, Stop Codon Removal And Dn/Ds Calulation In One Go?
7 days ago by sunnykevin97 ▴ 790
0
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0
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363
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Comment: Comment: Translation table for annotating fish genomes ?
8 days ago by sunnykevin97 ▴ 790
0
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1
reply
363
views
Comment: Comment: Translation table for annotating fish genomes ?
8 days ago by sunnykevin97 ▴ 790
0
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1
reply
363
views
Comment: Comment: Translation table for annotating fish genomes ?
8 days ago by sunnykevin97 ▴ 790
0
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6
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363
views
Translation table for annotating fish genomes ?
gene genome protein
8 days ago by sunnykevin97 ▴ 790
0
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0
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110
views
How to choose the substitution models for each partition ?
gene genome protein
8 days ago by sunnykevin97 ▴ 790
0
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0
replies
332
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Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
9 days ago by sunnykevin97 ▴ 790
2
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1
reply
332
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Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
9 days ago by sunnykevin97 ▴ 790
8
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7
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332
views
How to extract fasta subsequences from a multiline fasta file which has very long headers ?
gene genome protein
9 days ago by sunnykevin97 ▴ 790
0
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0
replies
332
views
Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
9 days ago by sunnykevin97 ▴ 790
0
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1
reply
6.2k
views
Comment: Comment: How do I extract Fasta Sequences based on a list of IDs?
9 days ago by sunnykevin97 ▴ 790
0
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0
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98
views
How to extract the CDS from a fasta file using the protein IDS ?
gene genome protein
10 days ago by sunnykevin97 ▴ 790
4
votes
4
replies
273
views
Why less Orthologs - can give enough information ?
gene genome protein
10 days ago by sunnykevin97 ▴ 790
0
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0
replies
273
views
Comment: Comment: Why less Orthologs - can give enough information ?
10 days ago by sunnykevin97 ▴ 790
3
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2
replies
219
views
Mauve - bacterial genome viewer?
Genome Software
13 days ago by sunnykevin97 ▴ 790
0
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0
replies
219
views
Answer: Answer: Mauve - bacterial genome viewer?
13 days ago by sunnykevin97 ▴ 790
0
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0
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3.3k
views
Comment: Comment: Hard-masked or soft-masked genome
15 days ago by sunnykevin97 ▴ 790
9
votes
2
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157
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Repeat Masking step is really important on Low coverage genomes (~9x-30X) ?
gene genome protein
updated 15 days ago by ▴ 200 • written 15 days ago by ▴ 790
2
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0
replies
670
views
Comment: Comment: Difference b/w primary and alternate genome assembly ?
16 days ago by sunnykevin97 ▴ 790
9
votes
3
replies
261
views
How do I extract a fasta sequence using the specific keyword (**Psychro**) ?
protein gene genome
written 21 days ago by ▴ 790
0
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0
replies
6.2k
views
Comment: Comment: How do I extract Fasta Sequences based on a list of IDs?
20 days ago by sunnykevin97 ▴ 790
2
votes
0
replies
261
views
Comment: Comment: How do I extract a fasta sequence using the specific keyword (**Psychro**) ?
20 days ago by sunnykevin97 ▴ 790
2
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2
replies
346
views
Comment: Comment: ncbi-genome-download - bacterial and viral genomes ?
23 days ago by sunnykevin97 ▴ 790
13
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5
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346
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ncbi-genome-download - bacterial and viral genomes ?
protein gene genome
updated 22 days ago by ▴ 200 • written 23 days ago by ▴ 790
0
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0
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477
views
Comment: Comment: Removing bacterial sequences from assembled eukaryotic draft genomes ?
23 days ago by sunnykevin97 ▴ 790
7
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6
replies
477
views
Removing bacterial sequences from assembled eukaryotic draft genomes ?
protein genome gene
updated 23 days ago by ★ 20k • written 24 days ago by ▴ 790
0
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0
replies
477
views
Comment: Comment: Removing bacterial sequences from assembled eukaryotic draft genomes ?
23 days ago by sunnykevin97 ▴ 790
0
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0
replies
352
views
Comment: Comment: BRAKER - Genome annotation, software error ?
28 days ago by sunnykevin97 ▴ 790
1
vote
3
replies
352
views
BRAKER - Genome annotation, software error ?
Genome Software
28 days ago by sunnykevin97 ▴ 790
0
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0
replies
352
views
Comment: Comment: BRAKER - Genome annotation, software error ?
4 weeks ago by sunnykevin97 ▴ 790
0
votes
2
replies
289
views
Forum: Bioinformatics algorithm tutorials in C++/C
protein gene genome
updated 4 weeks ago by 52k • written 4 weeks ago by ▴ 790
0
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0
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555
views
Comment: Comment: How to remove Duplicates in Sam file using AWK ?
5 weeks ago by sunnykevin97 ▴ 790
0
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1
reply
555
views
Comment: Comment: How to remove Duplicates in Sam file using AWK ?
5 weeks ago by sunnykevin97 ▴ 790
0
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0
replies
555
views
Comment: Comment: How to remove Duplicates in Sam file using AWK ?
6 weeks ago by sunnykevin97 ▴ 790
0
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1
reply
555
views
Comment: Comment: How to remove Duplicates in Sam file using AWK ?
6 weeks ago by sunnykevin97 ▴ 790
3
votes
9
replies
555
views
How to remove Duplicates in Sam file using AWK ?
protein genome gene
5 weeks ago by sunnykevin97 ▴ 790
3
votes
10
replies
2.2k
views
Gene starts with "LOC" prefix ?
RNA-Seq gene sequence
updated 6 weeks ago by 117k • written 24 months ago by ▴ 790
0
votes
0
replies
128
views
Downloading only specific datasets (Actinopterygii) from OrthoDB ?
genome gene
8 weeks ago by sunnykevin97 ▴ 790
0
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0
replies
2.4k
views
Comment: Comment: What are the recommended methods for merging de-novo assemblies?
8 weeks ago by sunnykevin97 ▴ 790
0
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1
reply
2.4k
views
Comment: Comment: What are the recommended methods for merging de-novo assemblies?
8 weeks ago by sunnykevin97 ▴ 790
0
votes
0
replies
151
views
How to generate Metaassembly for a genome?
genome gene
8 weeks ago by sunnykevin97 ▴ 790
1
vote
1
reply
325
views
Which sequences have to be used for prediction of orthologs, CDS or assembled contigs for phylogenomics study ?
genome gene
updated 8 weeks ago by 14k • written 8 weeks ago by ▴ 790
0
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0
replies
13k
views
Comment: Comment: How To Do Alignment, Stop Codon Removal And Dn/Ds Calulation In One Go?
9 weeks ago by sunnykevin97 ▴ 790
1
vote
3
replies
331
views
Most efficient command line tool for translating the DNA sequences into Protein ?
gene genome protein
updated 9 weeks ago by ★ 20k • written 9 weeks ago by ▴ 790
0
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1
reply
390
views
Comment: Comment: Renaming fasta files with their headers (gene name) ?
9 weeks ago by sunnykevin97 ▴ 790
0
votes
1
reply
390
views
Comment: Comment: Renaming fasta files with their headers (gene name) ?
9 weeks ago by sunnykevin97 ▴ 790
0
votes
1
reply
390
views
Comment: Comment: Renaming fasta files with their headers (gene name) ?
9 weeks ago by sunnykevin97 ▴ 790
0
votes
0
replies
396
views
Comment: Comment: How to replace the headers in a fasta files with same keyword?
9 weeks ago by sunnykevin97 ▴ 790
2
votes
0
replies
396
views
Comment: Comment: How to replace the headers in a fasta files with same keyword?
updated 9 weeks ago by 21k • written 9 weeks ago by ▴ 790
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