User: iraia.munoa
iraia.munoa • 10
- Reputation:
- 10
- Status:
- New User
- Location:
- Last seen:
- 3 days, 17 hours ago
- Joined:
- 2 months, 3 weeks ago
- Email:
- i**********@ehu.eus
Posts by iraia.munoa
<prev
• 3 results •
page 1 of 1 •
next >
1
vote
1
answer
124
views
1
answer
... Hi! I have a question about something similar. If I have 3 control and 3 treatment samples, each of one corresponding at a time point (24h 72h and 120h). How do you recommend to run strigtie? 1- If I want to compare in the differential expression analysis control and treatment in each time point do ...
written 4 weeks ago by
iraia.munoa • 10
• updated
4 weeks ago by
grant.hovhannisyan • 1.2k
0
votes
0
answers
128
views
0
answers
... Hi everybody,
I am new with RNA-Seq bioingormatic analysis and I am having some troubles when comparing results from visualization and final Ballgown outputs.
I have 6 RNA-Seq samples with two replicates for each one, and run in two different lines (So I have 4 fastq files for each sample).
First ...
written 4 weeks ago by
iraia.munoa • 10
• updated
4 weeks ago by
RamRS ♦ 18k
0
votes
1
answer
42k
views
1
answers
... Hi!
I have run bowtie2 for the alignment of my chip-seq files, and then run samtools view to convert the sam files in bam. Also I have run samtools sort, to sort the bam file and samtools index to index the bam file.
> bowtie2 -q -x mm10_genome -U file_trimmed.fq -S file.sam --no-unal
> samt ...
written 11 weeks ago by
iraia.munoa • 10
Latest awards to iraia.munoa
No awards yet. Soon to come :-)
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 2147 users visited in the last hour