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Comment: C: Are small RNAs included in a typical Illumina RNA seq dataset?
6.6 years ago by JC 13k
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Answer: A: Convert BAM files to paired end FASTQ
6.6 years ago by JC 13k
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Answer: A: De novo transcriptome assembly using Trinity
6.6 years ago by JC 13k
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Comment: C: Creation of a VCF file from scratch with python
6.6 years ago by JC 13k
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4.7k
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Comment: C: SRA and the relationship between biosamples, experiments and runs
6.6 years ago by JC 13k
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Comment: C: featurecounts flags for lncRNA and mRNA co-expression
6.6 years ago by JC 13k
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Comment: C: Is possible to recreate RNASeq count dataset from a dataset normalized with FPKM
6.6 years ago by JC 13k
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4.7k
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Answer: A: SRA and the relationship between biosamples, experiments and runs
6.6 years ago by JC 13k
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1.4k
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Comment: C: computing the functional similarity using the schlicker method
6.6 years ago by JC 13k
2
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3.1k
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Answer: A: How to extract only sequences that contain a specific percentage of Cysteines (
6.6 years ago by JC 13k
1
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2.2k
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Answer: A: featurecounts flags for lncRNA and mRNA co-expression
6.6 years ago by JC 13k
2
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2.0k
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Answer: A: Gene prediction tool
6.6 years ago by JC 13k
3
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2.3k
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Answer: A: Reference genome of wheat for Bowtie
6.6 years ago by JC 13k
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1.1k
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Comment: C: Number of Wheat transcript varies
6.6 years ago by JC 13k
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1.1k
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Answer: A: Number of Wheat transcript varies
6.6 years ago by JC 13k
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1.7k
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Answer: A: A large list of chromossome
6.6 years ago by JC 13k
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2.3k
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Answer: A: Advice on Blast output
6.6 years ago by JC 13k
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1.3k
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Answer: A: Converting genotypes to allele frequencies
6.6 years ago by JC 13k
2
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1.7k
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Comment: C: What kind of R Project I can do related to gene expression analysis or protein c
6.6 years ago by JC 13k
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2.6k
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Answer: A: RNA-SEQ SNP calling
6.6 years ago by JC 13k
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1.3k
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Answer: A: fasta q files or BAM files of RNA seq Oryza sativa(rice)
6.6 years ago by JC 13k
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1
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3.1k
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Answer: A: variant calling with ALT contigs in hg38
6.7 years ago by JC 13k
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1
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2.3k
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Answer: A: How to perform lncRNA differential gene expression analysis (unstranded)?
6.7 years ago by JC 13k
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1.5k
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Answer: A: Can I perform de novo analysis on RNA seq file of Mus musculus?
6.7 years ago by JC 13k
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1.9k
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Answer: A: List of sequences in a fasta file. I need to generate the reverse complement for
6.7 years ago by JC 13k
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3.5k
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Comment: C: for loop over bwa aln
6.7 years ago by JC 13k
3
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2.1k
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Answer: A: Installing a pre-built index with Bowtie(1)
6.7 years ago by JC 13k
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1.7k
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Answer: A: removed entrie sequence include specific letters
6.7 years ago by JC 13k
2
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3.0k
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Comment: C: How do I use t-test for genes in R?
6.8 years ago by JC 13k
2
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2.1k
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Answer: A: Need help finding a primer for a sequence
updated 6.8 years ago by 16k • written 6.8 years ago by 13k
2
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1.6k
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Answer: A: could I use female methylation data annotated using hg38?
6.8 years ago by JC 13k
5
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12k
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Answer: A: Counting base and nucleotide frequency of multifasta file
6.8 years ago by JC 13k
2
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1.3k
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Answer: A: RNA-seq data analysis for differential expression of a single gene
6.8 years ago by JC 13k
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1
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1.4k
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Answer: A: How to handle RNASeq reads that can map to both human and mouse ref (e.g. conser
6.8 years ago by JC 13k
2
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1
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2.8k
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Answer: A: Perl#replace a sequence name in fasta file with another name
6.8 years ago by JC 13k
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2.8k
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Comment: C: Perl#replace a sequence name in fasta file with another name
6.9 years ago by JC 13k
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3.3k
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Answer: A: How to match a FASTA header for extraction using Perl?
6.9 years ago by JC 13k
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3.2k
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Comment: C: help identifying bioinformatics operations tools
6.9 years ago by JC 13k
1
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1
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3.2k
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Answer: A: help identifying bioinformatics operations tools
6.9 years ago by JC 13k
1
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7.2k
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Comment: C: Tool to fix reference allele nucleotide in vcf
6.9 years ago by JC 13k
5
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2
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7.2k
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Answer: A: Tool to fix reference allele nucleotide in vcf
6.9 years ago by JC 13k
0
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2.8k
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Answer: A: Trying to use regular expressions to edit a PDB text file.What am I doing wrong?
6.9 years ago by JC 13k
1
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2.4k
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Answer: A: How do I replace the values in one file with the values in another file?
6.9 years ago by JC 13k
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1
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2.6k
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Comment: C: How to get fasta sequences for CDS if I have proteins IDs?
7.0 years ago by JC 13k
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1
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18k
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Comment: C: how to count variants by chromosome in a vcf file?
7.1 years ago by JC 13k
2
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2.3k
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Answer: A: count word ocurrences in fasta file
7.2 years ago by JC 13k
3
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3.0k
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Answer: A: Rstudio like IDE for perl
7.2 years ago by JC 13k
3
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1
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3.9k
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Comment: C: How to interpret PCA output statistically and biologically
7.2 years ago by JC 13k
1
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1
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2.9k
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Answer: A: merging of multi samples tabix and bzipped vcf files into one vcf file using Per
7.3 years ago by JC 13k
4
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1
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2.4k
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Comment: C: Fastq file download from pubmed
7.3 years ago by JC 13k
1,284 results • Page 15 of 26
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