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Comment: C: Gene Set Enrichment Analysis
4.9 years ago by Hamid Ghaedi 3.3k
1
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1
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2.9k
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Comment: C: heatmap in R
4.9 years ago by Hamid Ghaedi 3.3k
5
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2
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3.7k
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Answer: A: Survival analysis based on a set of genes for TCGA data
4.9 years ago by Hamid Ghaedi 3.3k
1
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0
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2.1k
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Comment: C: R or python packages for differential methylation levels analysis: case x contro
5.0 years ago by Hamid Ghaedi 3.3k
2
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0
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1.3k
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Comment: C: Best aligner to identify single point mutation
5.0 years ago by Hamid Ghaedi 3.3k
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0
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2.1k
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Comment: C: Alignment in WES
5.0 years ago by Hamid Ghaedi 3.3k
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1
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2.1k
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Comment: C: Alignment in WES
5.0 years ago by Hamid Ghaedi 3.3k
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0
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4.3k
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Comment: C: annotation - biomaRt - Error in UseMethod
5.0 years ago by Hamid Ghaedi 3.3k
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0
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3.4k
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Comment: C: WGCNA - what is it for
5.0 years ago by Hamid Ghaedi 3.3k
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1.9k
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Comment: C: HT-Seq count data coding gene
5.0 years ago by Hamid Ghaedi 3.3k
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0
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3.1k
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Comment: C: TCGA driver mutation data
5.0 years ago by Hamid Ghaedi 3.3k
1
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1
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5.2k
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Answer: A: Convert Log2 (FPKM+1) to FPKM in an expression matrix outputted from RSEM
5.0 years ago by Hamid Ghaedi 3.3k
2
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2
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3.1k
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Answer: C: TCGA driver mutation data
5.0 years ago by Hamid Ghaedi 3.3k
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0
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3.7k
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Comment: C: convert TCGA hg38 maf to hg 19 maf
5.0 years ago by Hamid Ghaedi 3.3k
0
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0
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4.1k
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Answer: A: How to plot heatmap of differentially expressed genes using limma results
5.0 years ago by Hamid Ghaedi 3.3k
1
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1
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19k
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Comment: C: Box plot for rna seq data
5.0 years ago by Hamid Ghaedi 3.3k
1
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1
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19k
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Comment: C: Box plot for rna seq data
5.0 years ago by Hamid Ghaedi 3.3k
1
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1
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19k
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Comment: C: Box plot for rna seq data
5.0 years ago by Hamid Ghaedi 3.3k
0
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1
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1.2k
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Comment: C: KEGG pathway IDs
5.0 years ago by Hamid Ghaedi 3.3k
4
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3
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19k
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Comment: C: Box plot for rna seq data
5.0 years ago by Hamid Ghaedi 3.3k
5
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1
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19k
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Answer: Answer: Box plot for rna seq data
3.6 years ago by Hamid Ghaedi 3.3k
0
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1
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2.3k
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Comment: C: genome coordinates hg19 from UCSC genome browser
5.0 years ago by Hamid Ghaedi 3.3k
0
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1
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2.3k
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Comment: C: genome coordinates hg19 from UCSC genome browser
5.0 years ago by Hamid Ghaedi 3.3k
0
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0
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3.1k
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Comment: C: Interpretation of two PCA plots
5.0 years ago by Hamid Ghaedi 3.3k
0
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2
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1.6k
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Comment: C: Big dataset how to plot gene expression differences?
5.0 years ago by Hamid Ghaedi 3.3k
0
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2
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1.6k
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Comment: C: Big dataset how to plot gene expression differences?
5.0 years ago by Hamid Ghaedi 3.3k
0
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1
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1.9k
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Comment: C: TCGA metastasis ID
5.0 years ago by Hamid Ghaedi 3.3k
1
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1
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2.9k
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Comment: C: heatmap in R
5.0 years ago by Hamid Ghaedi 3.3k
0
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1
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1.9k
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Answer: A: TCGA metastasis ID
5.0 years ago by Hamid Ghaedi 3.3k
4
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1
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1.3k
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Answer: A: How to determine significance of a variant?
5.0 years ago by Hamid Ghaedi 3.3k
0
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1
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2.9k
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Comment: C: heatmap in R
5.0 years ago by Hamid Ghaedi 3.3k
0
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1
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2.9k
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Comment: C: heatmap in R
5.0 years ago by Hamid Ghaedi 3.3k
0
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1
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2.9k
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Comment: C: heatmap in R
5.0 years ago by Hamid Ghaedi 3.3k
0
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0
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1.1k
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Comment: C: Can you add MAFs together for a gene and calculate the number of recessive indiv
5.0 years ago by Hamid Ghaedi 3.3k
2
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1
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5.2k
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Answer: A: Download all cases from TCGAbiolinks
5.0 years ago by Hamid Ghaedi 3.3k
1
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0
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2.1k
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Answer: A: Box plot and genetic data
5.0 years ago by Hamid Ghaedi 3.3k
0
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0
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6.2k
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Answer: A: Replacing NA values of a column using values from another column
5.0 years ago by Hamid Ghaedi 3.3k
0
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1
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886
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Comment: C: Note for Biostar moderators
5.0 years ago by Hamid Ghaedi 3.3k
4
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4
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886
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Note for Biostar moderators
R
updated 5.0 years ago by 154k • written 5.0 years ago by 3.3k
1
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0
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1.8k
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Comment: C: viral amplicons single-end assembly
5.0 years ago by Hamid Ghaedi 3.3k
1
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0
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4.9k
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Comment: C: Clustering of genes using FPKM
5.1 years ago by Hamid Ghaedi 3.3k
1
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1
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1.8k
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Answer: C: Infinium probes to Ensembl IDs
5.1 years ago by Hamid Ghaedi 3.3k
1
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0
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938
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Comment: C: Finding biomarkers between tumor and normal samples
5.1 years ago by Hamid Ghaedi 3.3k
0
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0
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825
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Comment: C: How to do a survival analysis on tumour data when there are multiple tumours per
5.1 years ago by Hamid Ghaedi 3.3k
0
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1
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2.8k
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Comment: C: Data transformation/normalization/scaling for machine learning using both RNA-Se
5.1 years ago by Hamid Ghaedi 3.3k
1
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0
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883
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Comment: C: transcriptome profiling in RNA-seq data
5.1 years ago by Hamid Ghaedi 3.3k
0
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0
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3.0k
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Comment: C: Pathways Analysis in R
5.1 years ago by Hamid Ghaedi 3.3k
1
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0
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2.0k
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Comment: C: Can anyone introduce me a free tool for finding upstream regulators of different
5.1 years ago by Hamid Ghaedi 3.3k
1
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1
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2.0k
views
Comment: C: Can anyone introduce me a free tool for finding upstream regulators of different
5.1 years ago by Hamid Ghaedi 3.3k
6
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0
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14k
views
Answer: Answer: for go enrichment analysis which tool do you recommend?
24 months ago by Hamid Ghaedi 3.3k
233 results • Page 4 of 5
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