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0
votes
0
replies
5.0k
views
Comment:
C: CombineGVCFs + GenotypeGVCFs for Freebayes gVCF files?
7.2 years ago by
William
★ 5.3k
0
votes
0
replies
1.6k
views
Comment:
C: Senior Software Developer
7.2 years ago by
William
★ 5.3k
1
vote
0
replies
2.9k
views
Comment:
C: How to filter a VCF on a set of samples having genotypes containing the minor al
7.3 years ago by
William
★ 5.3k
0
votes
1
reply
2.9k
views
Comment:
C: How to filter a VCF on a set of samples having genotypes containing the minor al
7.3 years ago by
William
★ 5.3k
1
vote
1
reply
4.6k
views
Comment:
C: Best tools for lifting over genome coordinates for non model organism (custom) r
7.4 years ago by
William
★ 5.3k
0
votes
1
reply
44k
views
Comment:
C: How to filter vcf file on minimum genotype depth and quality for each sample
7.8 years ago by
William
★ 5.3k
0
votes
1
reply
44k
views
Comment:
C: How to filter vcf file on minimum genotype depth and quality for each sample
7.8 years ago by
William
★ 5.3k
0
votes
1
reply
2.6k
views
Comment:
C: 10 to 1000X speedup of BWA read alignment trough compressive mapping: MIT CORA
8.0 years ago by
William
★ 5.3k
0
votes
1
reply
4.8k
views
Comment:
C: Output per variant and per sample heterozygosity fraction from VCF.
8.1 years ago by
William
★ 5.3k
0
votes
0
replies
4.8k
views
Comment:
C: Output per variant and per sample heterozygosity fraction from VCF.
8.1 years ago by
William
★ 5.3k
0
votes
0
replies
2.8k
views
Comment:
C: How to plot a histogram for billions of genotype quality values?
8.1 years ago by
William
★ 5.3k
0
votes
0
replies
4.2k
views
Comment:
C: Cnvnator Genotype Regions Error : Can'T Find Bin 1000
8.5 years ago by
William
★ 5.3k
0
votes
0
replies
5.1k
views
Comment:
C: How to annotate SNP variant records in a vcf file with IDs from a bed file?
8.5 years ago by
William
★ 5.3k
0
votes
0
replies
3.6k
views
Comment:
Comment: BCFTools view equivelent of GATK -T SelectVariants -sn sample_x --excludeNonVari
updated 20 months ago by
Ram
43k • written 8.6 years ago by
William
★ 5.3k
0
votes
0
replies
3.6k
views
Comment:
Comment: BCFTools view equivelent of GATK -T SelectVariants -sn sample_x --excludeNonVari
updated 20 months ago by
Ram
43k • written 8.6 years ago by
William
★ 5.3k
0
votes
0
replies
6.3k
views
Comment:
C: Perl6 and the Future of Bioinformatics - Compatibility and Integration
8.7 years ago by
William
★ 5.3k
0
votes
1
reply
3.8k
views
Comment:
C: Official specs and API's for proteomics data (like Adam, VCF, HTS-JDK) (both fil
9.3 years ago by
William
★ 5.3k
1
vote
1
reply
25k
views
Comment:
Comment: Genomics is not Special. Computational Biologists are reinventing the wheel for
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
William
★ 5.3k
0
votes
0
replies
20k
views
Comment:
Comment: Why is Hadoop not used a lot in bio-informatics?
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
William
★ 5.3k
0
votes
0
replies
6.1k
views
Comment:
Comment: Do freeBayes and platypus support gVCF (ie incremental variant calling for large
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
William
★ 5.3k
0
votes
0
replies
4.6k
views
Comment:
C: Open Source Variant Caller comparable to GATK Haplotype Caller?
9.6 years ago by
William
★ 5.3k
0
votes
0
replies
4.7k
views
Comment:
Comment: Principal component analysis for proteomics data ( like SNPRelate )
updated 2.3 years ago by
Ram
43k • written 9.7 years ago by
William
★ 5.3k
0
votes
1
reply
9.1k
views
Comment:
Comment: Bio-informatics salary distribution versus Java salary distribution in the UK
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
William
★ 5.3k
0
votes
0
replies
9.1k
views
Comment:
C: Bio-informatics salary distribution versus Java salary distribution in the UK
9.7 years ago by
William
★ 5.3k
0
votes
0
replies
3.2k
views
Comment:
C: Keats: A Scala (And Scalable) Port Of The Picard Genomics Library Of The Broad
10.1 years ago by
William
★ 5.3k
0
votes
2
replies
6.7k
views
Comment:
C: Standard Post Variant Call (Vcf) Analysis That Work Out Of The Box
10.5 years ago by
William
★ 5.3k
0
votes
0
replies
4.0k
views
Comment:
C: Best Way To View Haplotypes In Non-Human Organisms?
10.5 years ago by
William
★ 5.3k
0
votes
0
replies
34k
views
Comment:
C: Multi-Sample Vcf To Phylogenetic Tree.
10.6 years ago by
William
★ 5.3k
0
votes
1
reply
7.2k
views
Comment:
C: Sambamba: High Performance Alternative For Samtools And Picard For Indexing, Sor
10.6 years ago by
William
★ 5.3k
0
votes
0
replies
7.2k
views
Comment:
C: Sambamba: High Performance Alternative For Samtools And Picard For Indexing, Sor
10.6 years ago by
William
★ 5.3k
0
votes
1
reply
25k
views
Comment:
C: Difference Between Somatic And Germline Variant Calling?
10.6 years ago by
William
★ 5.3k
0
votes
1
reply
25k
views
Comment:
C: Difference Between Somatic And Germline Variant Calling?
10.6 years ago by
William
★ 5.3k
0
votes
0
replies
3.4k
views
Comment:
C: Cnvnator Deletion Calls All Based On Mapping Quality Zero Reads?
10.7 years ago by
William
★ 5.3k
0
votes
0
replies
3.0k
views
Comment:
C: Wgs Coverage
10.7 years ago by
William
★ 5.3k
0
votes
0
replies
2.6k
views
Comment:
C: Breakdancer Github Recursive Clone Fails , Unable To Clone Submodule "Build Como
10.7 years ago by
William
★ 5.3k
0
votes
1
reply
14k
views
Comment:
C: Samtools Sort Set Max Memory , Value In Bytes, Kb, Mb Or Gb ?
10.7 years ago by
William
★ 5.3k
0
votes
1
reply
14k
views
Comment:
C: Samtools Sort Set Max Memory , Value In Bytes, Kb, Mb Or Gb ?
10.7 years ago by
William
★ 5.3k
0
votes
1
reply
14k
views
Comment:
C: Samtools Sort Set Max Memory , Value In Bytes, Kb, Mb Or Gb ?
10.7 years ago by
William
★ 5.3k
0
votes
1
reply
14k
views
Comment:
C: Samtools Sort Set Max Memory , Value In Bytes, Kb, Mb Or Gb ?
10.7 years ago by
William
★ 5.3k
0
votes
0
replies
8.9k
views
Comment:
C: Transition/Transversion Ratio From Fastq Files
10.8 years ago by
William
★ 5.3k
0
votes
0
replies
4.5k
views
Comment:
C: What Do You Expect As The False Positive And Negative Rate For Snp'S And Indels
10.8 years ago by
William
★ 5.3k
0
votes
0
replies
4.5k
views
Comment:
C: What Do You Expect As The False Positive And Negative Rate For Snp'S And Indels
10.8 years ago by
William
★ 5.3k
0
votes
0
replies
5.3k
views
Comment:
C: How To Select The Top 30% Variants (Based On Quality) From A Vcf File?
10.8 years ago by
William
★ 5.3k
1
vote
1
reply
5.3k
views
Comment:
C: How To Select The Top 30% Variants (Based On Quality) From A Vcf File?
10.8 years ago by
William
★ 5.3k
0
votes
2
replies
14k
views
Comment:
C: Extract Coverage Track From Bam To Bed File
10.8 years ago by
William
★ 5.3k
0
votes
0
replies
14k
views
Comment:
C: Extract Coverage Track From Bam To Bed File
10.8 years ago by
William
★ 5.3k
0
votes
0
replies
15k
views
Comment:
C: Aligning Sequence Reads, Clone Sequences And Assembly Contigs With Bwa-Mem
10.9 years ago by
William
★ 5.3k
0
votes
0
replies
3.8k
views
Comment:
C: How To Call Variants (Snp, Indel, Sv) On A Bac Contig Aligned With Bwa Mem To A
10.9 years ago by
William
★ 5.3k
0
votes
0
replies
6.3k
views
Comment:
C: Samtools Api: Sequence And Quality Are Inconsistent
10.9 years ago by
William
★ 5.3k
0
votes
0
replies
5.3k
views
Comment:
C: How To Call Snp And Indel Based On A Sanger Sequences Based Bac Contig Vs Refere
10.9 years ago by
William
★ 5.3k
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