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4
votes
1
reply
19k
views
Answer:
A: Is There Any Other Method For Isoform-Level Differential Expression Analysis Exc
11.2 years ago by
Ryan Dale
5.0k
1
vote
0
replies
33k
views
Comment:
C: Converting Bam To Bedgraph For Viewing On Ucsc?
11.2 years ago by
Ryan Dale
5.0k
0
votes
1
reply
4.5k
views
Comment:
C: Light-Weight Script-Based Random Access To Large Gff3 Files Using Biopython
11.2 years ago by
Ryan Dale
5.0k
3
votes
0
replies
4.1k
views
Answer:
A: Best Practices For Pipeline Versioning
11.2 years ago by
Ryan Dale
5.0k
7
votes
0
replies
4.7k
views
Answer:
A: Why Some People Prefer To Use Ucsc Browser Instead Of Some Standalone Ones (Like
11.3 years ago by
Ryan Dale
5.0k
4
votes
0
replies
3.4k
views
Answer:
A: High Confidence Peaks From A Set Of Replicates
11.3 years ago by
Ryan Dale
5.0k
8
votes
4
replies
4.1k
views
Answer:
A: Simple Redirection, I/O Problem With Bedtools
11.3 years ago by
Ryan Dale
5.0k
4
votes
2
replies
8.0k
views
Answer:
A: Parsing Genbank Format In Bioperl.
11.3 years ago by
Ryan Dale
5.0k
4
votes
1
reply
6.6k
views
Answer:
A: Which Aligner Is Best Suited For Clip-Seq Data?
11.3 years ago by
Ryan Dale
5.0k
3
votes
1
reply
12k
views
Answer:
A: Finding Out Adapters Information In Small Rna Seq Data
updated 11.4 years ago by
Arun
2.4k • written 11.4 years ago by
Ryan Dale
5.0k
3
votes
0
replies
8.2k
views
Answer:
A: Visualizing Genomic Interactions
11.4 years ago by
Ryan Dale
5.0k
10
votes
2
replies
6.5k
views
Answer:
A: Extract Alu Repeats
11.4 years ago by
Ryan Dale
5.0k
0
votes
1
reply
6.1k
views
Comment:
C: Choosing Between Rpy2 Or R?
11.5 years ago by
Ryan Dale
5.0k
0
votes
0
replies
3.7k
views
Comment:
C: Remotely Access Bigwig File With Python
11.5 years ago by
Ryan Dale
5.0k
6
votes
6
replies
3.7k
views
Remotely Access Bigwig File With Python
python
bigwig
updated 11.5 years ago by
Michael Schubert
★ 7.1k • written 11.5 years ago by
Ryan Dale
5.0k
2
votes
1
reply
17k
views
Answer:
A: Promoter Or Enhancer Regions Bed Format
11.8 years ago by
Ryan Dale
5.0k
1
vote
0
replies
2.3k
views
Answer:
A: Human Expression Compendium?
11.8 years ago by
Ryan Dale
5.0k
4
votes
0
replies
11k
views
Answer:
A: How O Assign A Color Ro Bed Regions (Ucsc)
11.8 years ago by
Ryan Dale
5.0k
0
votes
0
replies
10k
views
Comment:
C: Htseq-Count Not Working With Bam From Tophat
11.9 years ago by
Ryan Dale
5.0k
0
votes
1
reply
10k
views
Comment:
C: Htseq-Count Not Working With Bam From Tophat
11.9 years ago by
Ryan Dale
5.0k
1
vote
0
replies
5.4k
views
Answer:
A: Rna-Seq Raw Counts
11.9 years ago by
Ryan Dale
5.0k
0
votes
0
replies
4.6k
views
Answer:
A: Multibamcov Or Htseq-Count To Count Read Per Feature ?
11.9 years ago by
Ryan Dale
5.0k
1
vote
1
reply
2.2k
views
Answer:
A: Cutadapt Assertionerror
11.9 years ago by
Ryan Dale
5.0k
0
votes
1
reply
3.7k
views
Comment:
C: Histone Modification Database For Positive And Negative
11.9 years ago by
Ryan Dale
5.0k
1
vote
1
reply
3.7k
views
Answer:
A: Histone Modification Database For Positive And Negative
11.9 years ago by
Ryan Dale
5.0k
5
votes
1
reply
8.5k
views
Answer:
A: Fastqc To Check The Quality Of High Throughput Sequence
11.9 years ago by
Ryan Dale
5.0k
5
votes
0
replies
3.1k
views
Answer:
A: What Situations Fit The Different Overlap Resolution Modes Of Htseq-Count/Summar
12.0 years ago by
Ryan Dale
5.0k
0
votes
0
replies
12k
views
Answer:
A: How To Read A Bigwig File Using Python
12.1 years ago by
Ryan Dale
5.0k
3
votes
0
replies
3.2k
views
Comment:
C: Chip-Seq Datasets For Human/Mouse Orthologs To Drosophila'S Beaf-32 And Chromato
12.1 years ago by
Ryan Dale
5.0k
5
votes
0
replies
7.5k
views
Answer:
A: How To Plot/Visualise Tfbs Positions Relative To Tss For Thousands Of Genes?
12.2 years ago by
Ryan Dale
5.0k
0
votes
0
replies
24k
views
Answer:
A: How Can I Find Target Genes Of A Transcription Factor?
12.2 years ago by
Ryan Dale
5.0k
8
votes
0
replies
5.2k
views
Answer:
A: Samtools View - What'S The Purpose Of The -T Option?
12.2 years ago by
Ryan Dale
5.0k
3
votes
0
replies
35k
views
Answer:
A: Heatmaps In R With Huge Data
12.3 years ago by
Ryan Dale
5.0k
34
votes
1
reply
22k
views
Answer:
A: The Difference Between Directional And Nondirectional Sequencing
12.4 years ago by
Ryan Dale
5.0k
5
votes
0
replies
5.0k
views
Answer:
A: Datasets For Which There Is Microarray And Rna-Seq Data On The Same Samples
12.4 years ago by
Ryan Dale
5.0k
13
votes
1
reply
41k
views
Answer:
A: What Control For Chip-Seq: Input, Igg Or Untagged Strain?
12.4 years ago by
Ryan Dale
5.0k
1
vote
0
replies
7.8k
views
Comment:
C: Filtering Stream Bam Output Idealy From Pysam/Python
12.4 years ago by
Ryan Dale
5.0k
2
votes
0
replies
15k
views
Answer:
A: Multi Thread Bedtools
12.4 years ago by
Ryan Dale
5.0k
1
vote
0
replies
4.2k
views
Comment:
C: Chip-Seq Ratio Intensity And Normalization
12.6 years ago by
Ryan Dale
5.0k
0
votes
0
replies
5.9k
views
Comment:
C: Getting The Error Probability Statistics From A (Large) Fastq File
12.6 years ago by
Ryan Dale
5.0k
5
votes
1
reply
5.9k
views
Answer:
A: Getting The Error Probability Statistics From A (Large) Fastq File
12.6 years ago by
Ryan Dale
5.0k
0
votes
0
replies
4.4k
views
Comment:
C: When Reviewing A Software Paper, Do You Talk About The Code Quality?
12.6 years ago by
Ryan Dale
5.0k
3
votes
0
replies
3.3k
views
Answer:
A: Your Daily Bioinformatics Pipeline/Library
12.6 years ago by
Ryan Dale
5.0k
1
vote
0
replies
12k
views
Comment:
C: Htseq Count To Get Rpkm Values
12.7 years ago by
Ryan Dale
5.0k
6
votes
2
replies
7.5k
views
Answer:
A: Differential Expression Analysis Theory/Tutorial For The Statistics Layman
12.7 years ago by
Ryan Dale
5.0k
0
votes
0
replies
4.0k
views
Comment:
C: How Do You Maintain Flexibility In Your Code, When You Don'T Know In Advance Whi
12.7 years ago by
Ryan Dale
5.0k
0
votes
0
replies
4.1k
views
Comment:
C: Python Documentation Tools
12.7 years ago by
Ryan Dale
5.0k
7
votes
0
replies
16k
views
Answer:
A: Any Good Bed/Wig Parsers In Python ?
12.8 years ago by
Ryan Dale
5.0k
5
votes
1
reply
2.7k
views
Answer:
A: Recommended Tools For De Novo Motif Discovery In Vertebrate Genome Tsses?
12.8 years ago by
Ryan Dale
5.0k
12
votes
2
replies
13k
views
Answer:
A: How To Map Gene Id Or Gene Symbol To Locus
12.8 years ago by
Ryan Dale
5.0k
215 results • Page
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