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Event- vs transcript-based approaches for analyzing alternative splicing
RNA-Seq
alternative splicing
rMATS
Salmon
3.8 years ago by
fmerkal
▴ 60
2
votes
1
reply
950
views
Regarding the use of Ensembl REST API for converting coordinates between assemblies
assembly
genome
alignment
RNA-Seq
updated 4.2 years ago by
Ben_Ensembl
★ 2.4k • written 4.2 years ago by
fmerkal
▴ 60
0
votes
0
replies
971
views
Interpreting liftOver output to extract orthologous exons between distantly related species.
rna-seq
R
genome
4.8 years ago by
fmerkal
▴ 60
3
votes
6
replies
3.9k
views
SAM to BAM conversion problem after HISAT2.
RNA-Seq
software error
rna-seq
updated 5.1 years ago by
eennadi
▴ 30 • written 5.1 years ago by
fmerkal
▴ 60
6
votes
7
replies
10.0k
views
(edgeR-related) DGElist error message 'Negative counts not allowed'.
RNA-Seq
rna-seq
software error
R
updated 5.1 years ago by
Gordon Smyth
★ 7.1k • written 5.1 years ago by
fmerkal
▴ 60
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