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Comment: Comment: CCA with random effects model
24 days ago by Chris Dean ▴ 390
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190
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Comment: Comment: Difference in relative abundance between MicrobiomeDB and r phyloseq
4 weeks ago by Chris Dean ▴ 390
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1
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430
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Comment: Comment: Differential express genes in imbalance groups
5 weeks ago by Chris Dean ▴ 390
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655
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Comment: Comment: Does removal of contaminants in RNAseq data have an impact on downstream analyse
6 weeks ago by Chris Dean ▴ 390
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655
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Comment: Comment: Does removal of contaminants in RNAseq data have an impact on downstream analyse
6 weeks ago by Chris Dean ▴ 390
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272
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Comment: Comment: UMI and index sequence in RNA-seq data
9 weeks ago by Chris Dean ▴ 390
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374
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Comment: Comment: How to do DESeq2 on Kallisto Data
11 weeks ago by Chris Dean ▴ 390
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1
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336
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Comment: Comment: Decision of Random Effect and Random Slope in rare cases
11 weeks ago by Chris Dean ▴ 390
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296
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Comment: Comment: Correcting Farm effects
12 weeks ago by Chris Dean ▴ 390
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488
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Comment: Comment: Options for assigning cell labels to barcodes from CITE-seq experiment
5 months ago by Chris Dean ▴ 390
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932
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Comment: Comment: Phyloseq sample data error: non-zero dimensions?
6 months ago by Chris Dean ▴ 390
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932
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Comment: Comment: Phyloseq sample data error: non-zero dimensions?
6 months ago by Chris Dean ▴ 390
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594
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Comment: Comment: No hits for influenza virus in an RNA seq. data using FAST Q screen (from babrah
6 months ago by Chris Dean ▴ 390
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5.8k
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Comment: Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
6 months ago by Chris Dean ▴ 390
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1
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473
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Comment: Comment: Adjusting covariate in regression model
8 months ago by Chris Dean ▴ 390
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478
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Comment: Comment: Assigning cell types to cells based on expression of cell surface markers
9 months ago by Chris Dean ▴ 390
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898
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Comment: Comment: phyloseq error
12 months ago by Chris Dean ▴ 390
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773
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Comment: Comment: Database for taxonomic assignment of shotgun sequencing reads data
16 months ago by Chris Dean ▴ 390
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754
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Comment: Comment: Need help in using dada2
18 months ago by Chris Dean ▴ 390
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500
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Comment: Comment: Identification of conserved and varaible regions on 16s rRNA sequences
22 months ago by Chris Dean ▴ 390
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1
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1.4k
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Comment: Comment: losing large amount of reads when using Qiime2 vsearch joinpairs command
23 months ago by Chris Dean ▴ 390
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1
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950
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Comment: Comment: Load cvs files into R to make manhattan plots using ggplot
2.1 years ago by Chris Dean ▴ 390
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2
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1.1k
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Comment: Comment: What should I choose for a bachelor's and master's degree
2.2 years ago by Chris Dean ▴ 390
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1.1k
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Comment: Comment: Bioinformatics Scientist
2.2 years ago by Chris Dean ▴ 390
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835
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Comment: Comment: Coping with duplicated sequences in shotgun analysis
2.2 years ago by Chris Dean ▴ 390
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807
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Comment: Comment: Name for bulk-metagenomic studies?
2.2 years ago by Chris Dean ▴ 390
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1
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1.0k
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Comment: Comment: Trimmomatic parameters
2.3 years ago by Chris Dean ▴ 390
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741
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Comment: Comment: How to calculate similarity of two bacterial compositions?
2.3 years ago by Chris Dean ▴ 390
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1
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741
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Comment: Comment: How to calculate similarity of two bacterial compositions?
2.3 years ago by Chris Dean ▴ 390
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882
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Comment: Comment: rarefaction curve
2.4 years ago by Chris Dean ▴ 390
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1
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788
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Comment: Comment: ordination analysis
2.4 years ago by Chris Dean ▴ 390
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946
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Comment: Comment: bowtie2 and then HISAT2? What does it mean in Data processing details on a paper
2.5 years ago by Chris Dean ▴ 390
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1
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2.4k
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Comment: Comment: Recommended mapper
2.5 years ago by Chris Dean ▴ 390
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2
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1.5k
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Comment: Comment: Subset a Vcf
2.5 years ago by Chris Dean ▴ 390
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2
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2.4k
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Comment: Comment: Using samtools to read a bam file
2.6 years ago by Chris Dean ▴ 390
1
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1
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2.4k
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Comment: Comment: Using samtools to read a bam file
2.6 years ago by Chris Dean ▴ 390
2
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1
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2.4k
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Comment: Comment: Using samtools to read a bam file
2.6 years ago by Chris Dean ▴ 390
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0
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665
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Comment: Comment: Interpretation of Shannon e Index
2.6 years ago by Chris Dean ▴ 390
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1.7k
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Comment: Comment: Nanopore metagenomics analysis
2.6 years ago by Chris Dean ▴ 390
2
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1
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1.4k
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Comment: Comment: bowtie2 results with NGS data
2.6 years ago by Chris Dean ▴ 390
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1
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1.4k
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Comment: Comment: bowtie2 results with NGS data
2.6 years ago by Chris Dean ▴ 390
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1
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2.3k
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Comment: Comment: what is the approximate size (in terms of storage) for a metagenomics/metaproteo
2.6 years ago by Chris Dean ▴ 390
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